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July 25, 2022 10:10
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(partial) EasyBuild log for failed build of /tmp/eb-au5wegqr/files_pr15900/l/LAMMPS/LAMMPS-23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.eb (PR(s) #15900) (easyblock PR(s) #2213)
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== 2022-07-25 10:10:04,193 easyblock.py:303 INFO This is EasyBuild 4.5.5 (framework: 4.5.5, easyblocks: 4.5.5) on host gpunode1.int.eessi-gpu.learnhpc.eu. | |
== 2022-07-25 10:10:04,193 easyblock.py:309 INFO This is easyblock EB_LAMMPS from module easybuild.easyblocks.lammps (/tmp/eb-au5wegqr/included-easyblocks-vfi50hal/easybuild/easyblocks/lammps.py) | |
== 2022-07-25 10:10:04,193 easyblock.py:969 INFO Build dir set to /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1 | |
== 2022-07-25 10:10:04,193 easyblock.py:1026 INFO Software install dir set to /project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1 | |
== 2022-07-25 10:10:04,194 easyblock.py:1031 INFO Module install dir set to /project/def-sponsor00/easybuild/modules/all | |
== 2022-07-25 10:10:04,194 easyblock.py:278 INFO Init completed for application name LAMMPS version 23Jun2022 | |
== 2022-07-25 10:10:04,194 easyconfig.py:1109 INFO filtered out dependency {'full_mod_name': None, 'short_mod_name': None, 'name': 'zlib', 'version': '1.2.11', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021a'}, 'toolchain_inherited': True, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}} | |
== 2022-07-25 10:10:04,194 easyconfig.py:1109 INFO filtered out dependency {'full_mod_name': None, 'short_mod_name': None, 'name': 'cURL', 'version': '7.76.0', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021a'}, 'toolchain_inherited': True, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}} | |
== 2022-07-25 10:10:04,195 easyblock.py:4022 INFO Obtained application instance of for LAMMPS (easyblock: None) | |
== 2022-07-25 10:10:04,195 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:04,195 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:04,195 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:04,196 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:04,199 one.py:175 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2022-07-25 10:10:04,199 one.py:175 INFO Skipping reformatting value for parameter 'toolchainopts' | |
== 2022-07-25 10:10:04,201 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/reprod_20220725101004_1913260 (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:04,201 easyblock.py:4276 INFO Dumped easyconfig instance to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/LAMMPS-23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.eb | |
== 2022-07-25 10:10:04,202 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:04,203 filetools.py:2395 INFO /tmp/eb-au5wegqr/included-easyblocks-vfi50hal/easybuild/easyblocks/lammps.py copied to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks/lammps.py | |
== 2022-07-25 10:10:04,203 easyblock.py:4256 INFO Dumped easyblock lammps.py required for reproduction to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks | |
== 2022-07-25 10:10:04,205 filetools.py:2395 INFO /project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/lib/python3.9/site-packages/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks/configuremake.py | |
== 2022-07-25 10:10:04,205 easyblock.py:4256 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks | |
== 2022-07-25 10:10:04,206 filetools.py:2395 INFO /project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/lib/python3.9/site-packages/easybuild/easyblocks/generic/cmakemake.py copied to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks/cmakemake.py | |
== 2022-07-25 10:10:04,206 easyblock.py:4256 INFO Dumped easyblock cmakemake.py required for reproduction to /tmp/eb-au5wegqr/reprod_20220725101004_1913260/easyblocks | |
== 2022-07-25 10:10:04,207 easyblock.py:2098 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2022-07-25 10:10:04,207 build_log.py:265 INFO building and installing LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1... | |
== 2022-07-25 10:10:04,210 filetools.py:1975 INFO Lock /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock does not exist | |
== 2022-07-25 10:10:04,211 filetools.py:1916 INFO Creating lock at /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock... | |
== 2022-07-25 10:10:04,211 filetools.py:1882 INFO Creating directory /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:04,211 filetools.py:1925 INFO Lock created: /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock | |
== 2022-07-25 10:10:04,211 build_log.py:265 INFO fetching files... | |
== 2022-07-25 10:10:04,213 easyblock.py:3748 INFO Starting fetch step | |
== 2022-07-25 10:10:04,214 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:04,214 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:04,214 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:04,214 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:04,214 easyblock.py:3756 INFO Running method fetch_step part of step fetch | |
== 2022-07-25 10:10:04,214 easyblock.py:2220 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2022-07-25 10:10:04,215 tools.py:271 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/bin/eb | |
== 2022-07-25 10:10:04,215 tools.py:285 INFO Also considering installation prefix /project/def-sponsor00/easybuild/software/EasyBuild/4.5.5 (determined via path to 'eb' script)... | |
== 2022-07-25 10:10:04,217 easyblock.py:780 INFO Found file stable_23Jun2022.tar.gz at /project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz | |
== 2022-07-25 10:10:04,218 easyblock.py:451 INFO Added sources: [{'name': 'stable_23Jun2022.tar.gz', 'path': '/project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz', 'cmd': None, 'checksum': 'd27ede095c9f00cd13a26f967a723d07cf8f4df65c700ed73573577bc173d5ce', 'finalpath': '/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1'}] | |
== 2022-07-25 10:10:04,218 easyblock.py:2263 INFO no patches provided | |
== 2022-07-25 10:10:04,490 easyblock.py:2273 INFO md5 checksum for /project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz: 1f7fc1b875fc7b3030856a0676911189 | |
== 2022-07-25 10:10:04,589 easyblock.py:2273 INFO sha256 checksum for /project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz: d27ede095c9f00cd13a26f967a723d07cf8f4df65c700ed73573577bc173d5ce | |
== 2022-07-25 10:10:04,589 easyblock.py:2308 INFO Checking dirs that need to be created: ['/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', '/project/def-sponsor00/easybuild/modules/all/LAMMPS', '/project/def-sponsor00/easybuild/modules/chem/LAMMPS'] | |
== 2022-07-25 10:10:04,592 configuremake.py:94 INFO config.guess version: 2018-08-29 (last updated: 2022-07-13T10:22:22.168984, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c) | |
== 2022-07-25 10:10:04,592 configuremake.py:150 INFO Found config.guess at /project/def-sponsor00/easybuild/sources/generic/eb_v4.5.5/ConfigureMake/config.guess | |
== 2022-07-25 10:10:04,592 build_log.py:265 INFO creating build dir, resetting environment... | |
== 2022-07-25 10:10:04,595 easyblock.py:3748 INFO Starting ready step | |
== 2022-07-25 10:10:04,596 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:04,596 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:04,596 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:04,596 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:04,596 easyblock.py:3756 INFO Running method check_readiness_step part of step ready | |
== 2022-07-25 10:10:04,600 run.py:233 INFO running cmd: ulimit -u | |
== 2022-07-25 10:10:04,604 easyblock.py:2117 INFO Setting parallelism: 4 | |
== 2022-07-25 10:10:04,662 easyblock.py:2169 WARNING Loaded modules detected: ['EasyBuild/4.5.5'] | |
== 2022-07-25 10:10:04,663 easyblock.py:3756 INFO Running method make_builddir part of step ready | |
== 2022-07-25 10:10:04,664 easyblock.py:1051 INFO Found old directory /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1 | |
== 2022-07-25 10:10:09,748 filetools.py:382 INFO Path /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1 successfully removed. | |
== 2022-07-25 10:10:09,748 easyblock.py:1059 INFO Removed old directory /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1 | |
== 2022-07-25 10:10:09,749 filetools.py:1882 INFO Creating directory /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1 (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:09,749 easyblock.py:3756 INFO Running method reset_env part of step ready | |
== 2022-07-25 10:10:09,750 easyblock.py:3756 INFO Running method handle_iterate_opts part of step ready | |
== 2022-07-25 10:10:09,750 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:09,753 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:09,753 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:09,753 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', parallel='4', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:09,753 build_log.py:265 INFO ... (took 5 secs) | |
== 2022-07-25 10:10:09,756 build_log.py:265 INFO unpacking... | |
== 2022-07-25 10:10:09,758 easyblock.py:3748 INFO Starting source step | |
== 2022-07-25 10:10:09,759 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:09,759 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:09,759 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:09,759 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', parallel='4', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:09,759 easyblock.py:3756 INFO Running method checksum_step part of step source | |
== 2022-07-25 10:10:09,857 easyblock.py:2326 INFO Checksum verification for /project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz using d27ede095c9f00cd13a26f967a723d07cf8f4df65c700ed73573577bc173d5ce passed. | |
== 2022-07-25 10:10:09,857 easyblock.py:3756 INFO Running method extract_step part of step source | |
== 2022-07-25 10:10:09,857 easyblock.py:2418 INFO Unpacking source stable_23Jun2022.tar.gz | |
== 2022-07-25 10:10:09,858 run.py:233 INFO running cmd: tar xzf /project/def-sponsor00/easybuild/sources/l/LAMMPS/stable_23Jun2022.tar.gz | |
== 2022-07-25 10:10:20,906 build_log.py:265 INFO ... (took 11 secs) | |
== 2022-07-25 10:10:20,909 build_log.py:265 INFO patching... | |
== 2022-07-25 10:10:20,912 easyblock.py:3748 INFO Starting patch step | |
== 2022-07-25 10:10:20,912 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:20,912 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:20,912 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:20,912 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', parallel='4', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:20,913 easyblock.py:3756 INFO Running method patch_step part of step patch | |
== 2022-07-25 10:10:20,913 build_log.py:265 INFO preparing... | |
== 2022-07-25 10:10:20,915 easyblock.py:3748 INFO Starting prepare step | |
== 2022-07-25 10:10:20,915 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:20,915 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:20,916 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:20,916 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', parallel='4', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:20,916 easyblock.py:3756 INFO Running method prepare_step part of step prepare | |
== 2022-07-25 10:10:20,917 easyconfig.py:1109 INFO filtered out dependency {'full_mod_name': None, 'short_mod_name': None, 'name': 'zlib', 'version': '1.2.11', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021a'}, 'toolchain_inherited': True, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}} | |
== 2022-07-25 10:10:20,917 easyconfig.py:1109 INFO filtered out dependency {'full_mod_name': None, 'short_mod_name': None, 'name': 'cURL', 'version': '7.76.0', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021a'}, 'toolchain_inherited': True, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}} | |
== 2022-07-25 10:10:20,918 environment.py:91 INFO Environment variable PKG_CONFIG_PATH set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/lib64/pkgconfig (previously undefined) | |
== 2022-07-25 10:10:20,918 modules.py:626 INFO Checking whether CMake/3.20.1-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,918 modules.py:631 INFO Module CMake/3.20.1-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,918 modules.py:654 INFO Result for existence check of CMake/3.20.1-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,918 modules.py:626 INFO Checking whether pkg-config/0.29.2-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,918 modules.py:631 INFO Module pkg-config/0.29.2-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,919 modules.py:654 INFO Result for existence check of pkg-config/0.29.2-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,919 modules.py:626 INFO Checking whether archspec/0.1.2-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,919 modules.py:631 INFO Module archspec/0.1.2-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,919 modules.py:654 INFO Result for existence check of archspec/0.1.2-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,919 modules.py:626 INFO Checking whether CUDA/11.3.1 exists... | |
== 2022-07-25 10:10:20,919 modules.py:631 INFO Module CUDA/11.3.1 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,919 modules.py:654 INFO Result for existence check of CUDA/11.3.1 module: True | |
== 2022-07-25 10:10:20,919 modules.py:626 INFO Checking whether UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1 exists... | |
== 2022-07-25 10:10:20,919 modules.py:631 INFO Module UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,919 modules.py:654 INFO Result for existence check of UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1 module: True | |
== 2022-07-25 10:10:20,919 modules.py:626 INFO Checking whether NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1 exists... | |
== 2022-07-25 10:10:20,920 modules.py:631 INFO Module NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,920 modules.py:654 INFO Result for existence check of NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1 module: True | |
== 2022-07-25 10:10:20,920 modules.py:626 INFO Checking whether Python/3.9.5-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,920 modules.py:631 INFO Module Python/3.9.5-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,920 modules.py:654 INFO Result for existence check of Python/3.9.5-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,920 modules.py:626 INFO Checking whether libpng/1.6.37-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,920 modules.py:631 INFO Module libpng/1.6.37-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,920 modules.py:654 INFO Result for existence check of libpng/1.6.37-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,920 modules.py:626 INFO Checking whether libjpeg-turbo/2.0.6-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,920 modules.py:631 INFO Module libjpeg-turbo/2.0.6-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,920 modules.py:654 INFO Result for existence check of libjpeg-turbo/2.0.6-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,920 modules.py:626 INFO Checking whether netCDF/4.8.0-gompi-2021a exists... | |
== 2022-07-25 10:10:20,921 modules.py:631 INFO Module netCDF/4.8.0-gompi-2021a exists (found in list of available modules) | |
== 2022-07-25 10:10:20,921 modules.py:654 INFO Result for existence check of netCDF/4.8.0-gompi-2021a module: True | |
== 2022-07-25 10:10:20,921 modules.py:626 INFO Checking whether GSL/2.7-GCC-10.3.0 exists... | |
== 2022-07-25 10:10:20,921 modules.py:631 INFO Module GSL/2.7-GCC-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,921 modules.py:654 INFO Result for existence check of GSL/2.7-GCC-10.3.0 module: True | |
== 2022-07-25 10:10:20,921 modules.py:626 INFO Checking whether gzip/1.10-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,921 modules.py:631 INFO Module gzip/1.10-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,921 modules.py:654 INFO Result for existence check of gzip/1.10-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,921 modules.py:626 INFO Checking whether HDF5/1.10.7-gompi-2021a exists... | |
== 2022-07-25 10:10:20,921 modules.py:631 INFO Module HDF5/1.10.7-gompi-2021a exists (found in list of available modules) | |
== 2022-07-25 10:10:20,921 modules.py:654 INFO Result for existence check of HDF5/1.10.7-gompi-2021a module: True | |
== 2022-07-25 10:10:20,922 modules.py:626 INFO Checking whether PCRE/8.44-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,922 modules.py:631 INFO Module PCRE/8.44-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,922 modules.py:654 INFO Result for existence check of PCRE/8.44-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,922 modules.py:626 INFO Checking whether libxml2/2.9.10-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,922 modules.py:631 INFO Module libxml2/2.9.10-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,922 modules.py:654 INFO Result for existence check of libxml2/2.9.10-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,922 modules.py:626 INFO Checking whether FFmpeg/4.3.2-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,922 modules.py:631 INFO Module FFmpeg/4.3.2-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,922 modules.py:654 INFO Result for existence check of FFmpeg/4.3.2-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,922 modules.py:626 INFO Checking whether Voro++/0.4.6-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,922 modules.py:631 INFO Module Voro++/0.4.6-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,923 modules.py:654 INFO Result for existence check of Voro++/0.4.6-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,923 modules.py:626 INFO Checking whether kim-api/2.2.1-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,923 modules.py:631 INFO Module kim-api/2.2.1-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,923 modules.py:654 INFO Result for existence check of kim-api/2.2.1-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,923 modules.py:626 INFO Checking whether Eigen/3.3.9-GCCcore-10.3.0 exists... | |
== 2022-07-25 10:10:20,923 modules.py:631 INFO Module Eigen/3.3.9-GCCcore-10.3.0 exists (found in list of available modules) | |
== 2022-07-25 10:10:20,923 modules.py:654 INFO Result for existence check of Eigen/3.3.9-GCCcore-10.3.0 module: True | |
== 2022-07-25 10:10:20,923 modules.py:626 INFO Checking whether PLUMED/2.7.2-foss-2021a exists... | |
== 2022-07-25 10:10:20,923 modules.py:631 INFO Module PLUMED/2.7.2-foss-2021a exists (found in list of available modules) | |
== 2022-07-25 10:10:20,923 modules.py:654 INFO Result for existence check of PLUMED/2.7.2-foss-2021a module: True | |
== 2022-07-25 10:10:20,923 modules.py:626 INFO Checking whether ScaFaCoS/1.0.1-foss-2021a exists... | |
== 2022-07-25 10:10:20,923 modules.py:631 INFO Module ScaFaCoS/1.0.1-foss-2021a exists (found in list of available modules) | |
== 2022-07-25 10:10:20,924 modules.py:654 INFO Result for existence check of ScaFaCoS/1.0.1-foss-2021a module: True | |
== 2022-07-25 10:10:20,924 modules.py:626 INFO Checking whether SciPy-bundle/2021.05-foss-2021a exists... | |
== 2022-07-25 10:10:20,924 modules.py:631 INFO Module SciPy-bundle/2021.05-foss-2021a exists (found in list of available modules) | |
== 2022-07-25 10:10:20,924 modules.py:654 INFO Result for existence check of SciPy-bundle/2021.05-foss-2021a module: True | |
== 2022-07-25 10:10:20,924 modules.py:626 INFO Checking whether foss/2021a exists... | |
== 2022-07-25 10:10:20,924 modules.py:633 INFO Module foss/2021a not found in list of available modules, checking via 'module show'... | |
== 2022-07-25 10:10:21,122 modules.py:654 INFO Result for existence check of foss/2021a module: True | |
== 2022-07-25 10:10:27,867 modules.py:626 INFO Checking whether foss/2021a exists... | |
== 2022-07-25 10:10:27,867 modules.py:633 INFO Module foss/2021a not found in list of available modules, checking via 'module show'... | |
== 2022-07-25 10:10:27,868 modules.py:654 INFO Result for existence check of foss/2021a module: True | |
== 2022-07-25 10:10:27,869 toolchain.py:760 INFO List of toolchain dependency modules and toolchain definition match! | |
== 2022-07-25 10:10:27,870 compiler.py:361 INFO _set_optimal_architecture: using march=native as optarch for x86_64. | |
== 2022-07-25 10:10:27,887 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/include was not found | |
== 2022-07-25 10:10:27,890 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/include was not found | |
== 2022-07-25 10:10:27,890 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/lib64 was not found | |
== 2022-07-25 10:10:27,890 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/lib was not found | |
== 2022-07-25 10:10:27,890 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/include was not found | |
== 2022-07-25 10:10:27,891 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/lib64 was not found | |
== 2022-07-25 10:10:27,891 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/lib was not found | |
== 2022-07-25 10:10:27,891 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/include was not found | |
== 2022-07-25 10:10:27,919 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1/include was not found | |
== 2022-07-25 10:10:27,919 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1/lib64 was not found | |
== 2022-07-25 10:10:27,919 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/UCX-CUDA/1.10.0-GCCcore-10.3.0-CUDA-11.3.1/lib was not found | |
== 2022-07-25 10:10:27,924 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/include was not found | |
== 2022-07-25 10:10:27,924 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/lib64 was not found | |
== 2022-07-25 10:10:27,925 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/lib was not found | |
== 2022-07-25 10:10:27,929 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/Eigen/3.3.9-GCCcore-10.3.0/lib64 was not found | |
== 2022-07-25 10:10:27,929 variables.py:201 WARNING flags_for_subdirs: directory /project/def-sponsor00/easybuild/software/Eigen/3.3.9-GCCcore-10.3.0/lib was not found | |
== 2022-07-25 10:10:27,932 variables.py:201 WARNING flags_for_subdirs: directory /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/include was not found | |
== 2022-07-25 10:10:27,937 environment.py:91 INFO Environment variable BLAS_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,937 environment.py:91 INFO Environment variable EBVARBLAS_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,937 environment.py:91 INFO Environment variable BLAS_LAPACK_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable BLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable BLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,938 environment.py:91 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable BLAS_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable EBVARBLAS_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable BLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable EBVARBLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable BLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,939 environment.py:91 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,940 environment.py:91 INFO Environment variable BLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,940 environment.py:91 INFO Environment variable EBVARBLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,940 environment.py:91 INFO Environment variable BLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,940 environment.py:91 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable CC set to mpicc (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable EBVARCC set to mpicc (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable CC_SEQ set to gcc (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable EBVARCC_SEQ set to gcc (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable CPPFLAGS set to -I/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/include -I/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/include -I/project/def-sponsor00/easybuild/software/Eigen/3.3.9-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/include -I/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/include -I/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/include -I/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/include -I/project/def-sponsor00/easybuild/software/CUDA/11.3.1/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable EBVARCPPFLAGS set to -I/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/include -I/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/include -I/project/def-sponsor00/easybuild/software/Eigen/3.3.9-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/include -I/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/include -I/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/include -I/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/include -I/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/include -I/project/def-sponsor00/easybuild/software/CUDA/11.3.1/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include -I/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable CXX set to mpicxx (previously undefined) | |
== 2022-07-25 10:10:27,941 environment.py:91 INFO Environment variable EBVARCXX set to mpicxx (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable CXX_SEQ set to g++ (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable EBVARCXX_SEQ set to g++ (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable F77 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable EBVARF77 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable F77_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable EBVARF77_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable F90 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,942 environment.py:91 INFO Environment variable EBVARF90 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable F90_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable EBVARF90_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable FC set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable EBVARFC set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable FC_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable EBVARFC_SEQ set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,943 environment.py:91 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fopenmp (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable FFTW_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable EBVARFFTW_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable FFTW_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable EBVARFFTW_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable FFTW_SHARED_LIBS set to libfftw3_mpi.so,libfftw3.so (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable EBVARFFTW_SHARED_LIBS set to libfftw3_mpi.so,libfftw3.so (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable FFTW_SHARED_LIBS_MT set to libfftw3_omp.so,libfftw3.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable EBVARFFTW_SHARED_LIBS_MT set to libfftw3_omp.so,libfftw3.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,944 environment.py:91 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3_mpi.a,libfftw3.a (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3_mpi.a,libfftw3.a (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable FFTW_STATIC_LIBS_MT set to libfftw3_omp.a,libfftw3.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to libfftw3_omp.a,libfftw3.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable FFT_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable EBVARFFT_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/include (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable FFT_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable EBVARFFT_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable FFT_SHARED_LIBS set to libfftw3_mpi.so,libfftw3.so (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable EBVARFFT_SHARED_LIBS set to libfftw3_mpi.so,libfftw3.so (previously undefined) | |
== 2022-07-25 10:10:27,945 environment.py:91 INFO Environment variable FFT_SHARED_LIBS_MT set to libfftw3_omp.so,libfftw3.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable EBVARFFT_SHARED_LIBS_MT set to libfftw3_omp.so,libfftw3.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable FFT_STATIC_LIBS set to libfftw3_mpi.a,libfftw3.a (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3_mpi.a,libfftw3.a (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3_omp.a,libfftw3.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3_omp.a,libfftw3.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable FLIBS set to -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable EBVARFLIBS set to -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable LAPACK_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable EBVARLAPACK_INC_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/include/flexiblas (previously undefined) | |
== 2022-07-25 10:10:27,946 environment.py:91 INFO Environment variable LAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable LDFLAGS set to -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/lib64 -L/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/lib64 -L/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/lib64 -L/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/lib -L/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/lib -L/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/lib64 -L/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/lib -L/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/lib64 -L/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/lib -L/project/def-sponsor00/easybuild/software/CUDA/11.3.1/lib64 -L/project/def-sponsor00/easybuild/software/CUDA/11.3.1/lib -L/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,947 environment.py:91 INFO Environment variable EBVARLDFLAGS set to -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/lib64 -L/project/def-sponsor00/easybuild/software/ScaFaCoS/1.0.1-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/lib64 -L/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/lib -L/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/lib64 -L/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/lib -L/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/lib -L/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/lib64 -L/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/lib -L/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/lib -L/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/lib64 -L/project/def-sponsor00/easybuild/software/NCCL/2.10.3-GCCcore-10.3.0-CUDA-11.3.1/lib -L/project/def-sponsor00/easybuild/software/CUDA/11.3.1/lib64 -L/project/def-sponsor00/easybuild/software/CUDA/11.3.1/lib -L/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/lib64 -L/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/lib -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/lib64 -L/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/lib (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable LIBBLAS set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable EBVARLIBBLAS set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable LIBBLAS_MT set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable EBVARLIBBLAS_MT set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable LIBFFT set to -lfftw3_mpi -lfftw3 (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable EBVARLIBFFT set to -lfftw3_mpi -lfftw3 (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable LIBFFT_MT set to -lfftw3_omp -lfftw3 -lpthread (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3_omp -lfftw3 -lpthread (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable LIBLAPACK set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,948 environment.py:91 INFO Environment variable EBVARLIBLAPACK set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable LIBLAPACK_MT set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable EBVARLIBLAPACK_MT set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable LIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable LIBLAPACK_ONLY set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable LIBS set to -lm -lpthread (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable EBVARLIBS set to -lm -lpthread (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable LIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,949 environment.py:91 INFO Environment variable EBVARLIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable LIBSCALAPACK_MT set to -lscalapack -lflexiblas -lpthread -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable EBVARLIBSCALAPACK_MT set to -lscalapack -lflexiblas -lpthread -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable LIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable MPICC set to mpicc (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable EBVARMPICC set to mpicc (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable MPICXX set to mpicxx (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable EBVARMPICXX set to mpicxx (previously undefined) | |
== 2022-07-25 10:10:27,950 environment.py:91 INFO Environment variable MPIF77 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable EBVARMPIF77 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable MPIF90 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable EBVARMPIF90 set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable MPIFC set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable EBVARMPIFC set to mpifort (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable MPI_INC_DIR set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/include (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable EBVARMPI_INC_DIR set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/include (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable MPI_LIB_DIR set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/lib64 (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable EBVARMPI_LIB_DIR set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/lib64 (previously undefined) | |
== 2022-07-25 10:10:27,951 environment.py:91 INFO Environment variable MPI_LIB_SHARED set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/lib64/libmpi.so (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable EBVARMPI_LIB_SHARED set to /project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/lib64/libmpi.so (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable MPI_LIB_STATIC set to (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable EBVARMPI_LIB_STATIC set to (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable OMPI_CC set to gcc (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable EBVAROMPI_CC set to gcc (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable OMPI_CXX set to g++ (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable EBVAROMPI_CXX set to g++ (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable OMPI_F77 set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable EBVAROMPI_F77 set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,952 environment.py:91 INFO Environment variable OMPI_F90 set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVAROMPI_F90 set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable OMPI_FC set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVAROMPI_FC set to gfortran (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable PRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable SCALAPACK_INC_DIR set to (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVARSCALAPACK_INC_DIR set to (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable SCALAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib (previously undefined) | |
== 2022-07-25 10:10:27,953 environment.py:91 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/ScaLAPACK/2.1.0-gompi-2021a-fb/lib (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable SCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable EBVARSCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable SCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable EBVARSCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable SCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,954 environment.py:91 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previously undefined) | |
== 2022-07-25 10:10:27,954 toolchain.py:954 INFO Putting RPATH wrappers in place... | |
== 2022-07-25 10:10:27,966 filetools.py:525 INFO Command gcc found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/gcc | |
== 2022-07-25 10:10:27,973 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:27,973 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper/gcc | |
== 2022-07-25 10:10:27,974 environment.py:91 INFO Environment variable PATH set to 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| |
== 2022-07-25 10:10:27,974 filetools.py:525 INFO Command gcc found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper/gcc | |
== 2022-07-25 10:10:27,974 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/gcc: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper/gcc (log: /dev/null) | |
== 2022-07-25 10:10:27,979 filetools.py:525 INFO Command g++ found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/g++ | |
== 2022-07-25 10:10:27,984 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:27,985 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper/g++ | |
== 2022-07-25 10:10:27,985 environment.py:91 INFO Environment variable PATH set to 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| |
== 2022-07-25 10:10:27,985 filetools.py:525 INFO Command g++ found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper/g++ | |
== 2022-07-25 10:10:27,985 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/g++: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper/g++ (log: /dev/null) | |
== 2022-07-25 10:10:27,991 filetools.py:525 INFO Command gfortran found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/gfortran | |
== 2022-07-25 10:10:27,996 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:27,996 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2022-07-25 10:10:27,996 environment.py:91 INFO Environment variable PATH set to 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| |
== 2022-07-25 10:10:27,996 filetools.py:525 INFO Command gfortran found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2022-07-25 10:10:27,996 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin/gfortran: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper/gfortran (log: /dev/null) | |
== 2022-07-25 10:10:28,001 filetools.py:525 INFO Command ld found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld | |
== 2022-07-25 10:10:28,003 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:28,003 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper/ld | |
== 2022-07-25 10:10:28,003 environment.py:91 INFO Environment variable PATH set to 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| |
== 2022-07-25 10:10:28,004 filetools.py:525 INFO Command ld found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper/ld | |
== 2022-07-25 10:10:28,004 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper/ld (log: /dev/null) | |
== 2022-07-25 10:10:28,009 filetools.py:525 INFO Command ld.gold found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld.gold | |
== 2022-07-25 10:10:28,012 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:28,013 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2022-07-25 10:10:28,013 environment.py:91 INFO Environment variable PATH set to /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/bin:/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/bin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/sbin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pybind11/2.6.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FriBidi/1.0.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/X11/20210518-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/fontconfig/2.13.93-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/freetype/2.10.4-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Brotli/1.0.9-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/expat/2.2.9-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x265/3.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/LAME/3.100-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x264/20210414-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/NASM/2.15.05-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/nvvm/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/bin:/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SQLite/3.35.4-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Tcl/8.6.11-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libarchive/3.5.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/PMIx/3.2.3-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libfabric/1.12.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/UCX/1.10.0-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libevent/2.1.12-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/OpenSSL/1.1/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/sbin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/numactl/2.0.14-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin:/project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/bin:/home/ocaisa/.yarn/bin:/home/ocaisa/.config/yarn/global/node_modules/.bin:/opt/software/slurm/bin:/opt/ipython-kernel/bin:/localscratch/ocaisa.375.0/bin:/home/ocaisa/.local/bin:/home/ocaisa/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin (previous value: '/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/bin:/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/bin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/sbin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pybind11/2.6.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FriBidi/1.0.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/X11/20210518-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/fontconfig/2.13.93-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/freetype/2.10.4-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Brotli/1.0.9-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/expat/2.2.9-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x265/3.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/LAME/3.100-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x264/20210414-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/NASM/2.15.05-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/nvvm/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/bin:/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SQLite/3.35.4-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Tcl/8.6.11-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libarchive/3.5.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/PMIx/3.2.3-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libfabric/1.12.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/UCX/1.10.0-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libevent/2.1.12-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/OpenSSL/1.1/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/sbin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/numactl/2.0.14-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin:/project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/bin:/home/ocaisa/.yarn/bin:/home/ocaisa/.config/yarn/global/node_modules/.bin:/opt/software/slurm/bin:/opt/ipython-kernel/bin:/localscratch/ocaisa.375.0/bin:/home/ocaisa/.local/bin:/home/ocaisa/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin') | |
== 2022-07-25 10:10:28,013 filetools.py:525 INFO Command ld.gold found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2022-07-25 10:10:28,013 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld.gold: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper/ld.gold (log: /dev/null) | |
== 2022-07-25 10:10:28,018 filetools.py:525 INFO Command ld.bfd found at /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld.bfd | |
== 2022-07-25 10:10:28,020 filetools.py:1882 INFO Creating directory /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.bfd_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2022-07-25 10:10:28,020 filetools.py:1734 INFO Adjusting permissions recursively for /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2022-07-25 10:10:28,020 environment.py:91 INFO Environment variable PATH set to /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.bfd_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/bin:/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/bin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/sbin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pybind11/2.6.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FriBidi/1.0.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/X11/20210518-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/fontconfig/2.13.93-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/freetype/2.10.4-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Brotli/1.0.9-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/expat/2.2.9-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x265/3.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/LAME/3.100-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x264/20210414-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/NASM/2.15.05-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/nvvm/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/bin:/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SQLite/3.35.4-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Tcl/8.6.11-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libarchive/3.5.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/PMIx/3.2.3-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libfabric/1.12.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/UCX/1.10.0-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libevent/2.1.12-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/OpenSSL/1.1/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/sbin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/numactl/2.0.14-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin:/project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/bin:/home/ocaisa/.yarn/bin:/home/ocaisa/.config/yarn/global/node_modules/.bin:/opt/software/slurm/bin:/opt/ipython-kernel/bin:/localscratch/ocaisa.375.0/bin:/home/ocaisa/.local/bin:/home/ocaisa/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin (previous value: '/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.gold_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gfortran_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gxx_wrapper:/tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/gcc_wrapper:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SciPy-bundle/2021.05-foss-2021a/bin:/project/def-sponsor00/easybuild/software/PLUMED/2.7.2-foss-2021a/bin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/sbin:/project/def-sponsor00/easybuild/software/ICU/69.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pybind11/2.6.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/kim-api/2.2.1-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Voro++/0.4.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FFmpeg/4.3.2-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/FriBidi/1.0.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/X11/20210518-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/fontconfig/2.13.93-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/freetype/2.10.4-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/Brotli/1.0.9-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/expat/2.2.9-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x265/3.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/LAME/3.100-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/x264/20210414-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libxml2/2.9.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/PCRE/8.44-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/HDF5/1.10.7-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/gzip/1.10-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/GSL/2.7-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/netCDF/4.8.0-gompi-2021a/bin:/project/def-sponsor00/easybuild/software/libjpeg-turbo/2.0.6-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/NASM/2.15.05-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/libpng/1.6.37-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Python/3.9.5-GCCcore-10.3.0/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/nvvm/bin:/project/def-sponsor00/easybuild/software/CUDA/11.3.1/bin:/project/def-sponsor00/easybuild/software/archspec/0.1.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/SQLite/3.35.4-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/Tcl/8.6.11-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/pkg-config/0.29.2-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/CMake/3.20.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libarchive/3.5.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FFTW/3.3.9-gompi-2021a/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/FlexiBLAS/3.0.4-GCC-10.3.0/bin:/project/def-sponsor00/easybuild/software/OpenMPI/4.1.1-GCC-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/PMIx/3.2.3-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libfabric/1.12.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/UCX/1.10.0-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/libevent/2.1.12-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/OpenSSL/1.1/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/sbin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/hwloc/2.4.1-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/numactl/2.0.14-GCCcore-10.3.0/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/software/linux/x86_64/amd/zen2/software/GCCcore/10.3.0/bin:/project/def-sponsor00/easybuild/software/EasyBuild/4.5.5/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin:/cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/bin:/home/ocaisa/.yarn/bin:/home/ocaisa/.config/yarn/global/node_modules/.bin:/opt/software/slurm/bin:/opt/ipython-kernel/bin:/localscratch/ocaisa.375.0/bin:/home/ocaisa/.local/bin:/home/ocaisa/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin') | |
== 2022-07-25 10:10:28,020 filetools.py:525 INFO Command ld.bfd found at /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2022-07-25 10:10:28,020 toolchain.py:1035 INFO RPATH wrapper script for /cvmfs/pilot.eessi-hpc.org/versions/2021.12/compat/linux/x86_64/usr/bin/ld.bfd: /tmp/eb-au5wegqr/tmpj0ygx8ht/rpath_wrappers/ld.bfd_wrapper/ld.bfd (log: /dev/null) | |
== 2022-07-25 10:10:28,021 easyblock.py:1094 INFO Enabling CUDA PTX cache of size 1024 MiB at /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1/eb-cuda-cache | |
== 2022-07-25 10:10:28,021 environment.py:91 INFO Environment variable CUDA_CACHE_DISABLE set to 0 (previously undefined) | |
== 2022-07-25 10:10:28,021 environment.py:91 INFO Environment variable CUDA_CACHE_PATH set to /project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1/eb-cuda-cache (previously undefined) | |
== 2022-07-25 10:10:28,021 environment.py:91 INFO Environment variable CUDA_CACHE_MAXSIZE set to 1073741824 (previously undefined) | |
== 2022-07-25 10:10:28,022 easyblock.py:2001 INFO Using /project/60005/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1/lammps-stable_23Jun2022/ as start dir | |
== 2022-07-25 10:10:28,022 environment.py:112 INFO Unsetting environment variable LIBS (value: -lm -lpthread) | |
== 2022-07-25 10:10:28,022 build_log.py:265 INFO ... (took 7 secs) | |
== 2022-07-25 10:10:28,025 build_log.py:265 INFO configuring... | |
== 2022-07-25 10:10:28,027 easyblock.py:3748 INFO Starting configure step | |
== 2022-07-25 10:10:28,027 easyconfig.py:1686 INFO Generating template values... | |
== 2022-07-25 10:10:28,028 mpi.py:120 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2022-07-25 10:10:28,028 mpi.py:305 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2022-07-25 10:10:28,028 easyconfig.py:1705 INFO Template values: arch='x86_64', bitbucket_account='lammps', builddir='/project/def-sponsor00/easybuild/build/LAMMPS/23Jun2022/foss-2021a-kokkos-CUDA-11.3.1', cudamajver='11', cudaminver='3', cudashortver='11.3', cudaver='11.3.1', github_account='lammps', installdir='/project/def-sponsor00/easybuild/software/LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', module_name='LAMMPS/23Jun2022-foss-2021a-kokkos-CUDA-11.3.1', mpi_cmd_prefix='mpirun -n 1', name='LAMMPS', nameletter='L', nameletterlower='l', namelower='lammps', parallel='4', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.5', toolchain_name='foss', toolchain_version='2021a', version='23Jun2022', version_major='23Jun2022', versionprefix='', versionsuffix='-kokkos-CUDA-11.3.1' | |
== 2022-07-25 10:10:28,028 easyblock.py:3756 INFO Running method configure_step part of step configure | |
== 2022-07-25 10:10:28,074 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/software/EasyBuild/4.5.5/lib/python3.9/site-packages/easybuild/base/exceptions.py:124 in __init__): No CUDA compute capabilities specified. | |
To build LAMMPS with Cuda you need to usethe --cuda-compute-capabilities configuration option or the cuda_compute_capabilities easyconfig parameter to specify a list of CUDA compute capabilities to compile with. (at easybuild/easyblocks/lammps.py:579 in check_cuda_compute_capabilities) | |
== 2022-07-25 10:10:28,075 filetools.py:1983 INFO Removing lock /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock... | |
== 2022-07-25 10:10:28,076 filetools.py:382 INFO Path /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock successfully removed. | |
== 2022-07-25 10:10:28,076 filetools.py:1987 INFO Lock removed: /project/def-sponsor00/easybuild/software/.locks/_project_def-sponsor00_easybuild_software_LAMMPS_23Jun2022-foss-2021a-kokkos-CUDA-11.3.1.lock | |
== 2022-07-25 10:10:28,076 easyblock.py:4079 WARNING build failed (first 300 chars): No CUDA compute capabilities specified. | |
To build LAMMPS with Cuda you need to usethe --cuda-compute-capabilities configuration option or the cuda_compute_capabilities easyconfig parameter to specify a list of CUDA compute capabilities to compile with. | |
== 2022-07-25 10:10:28,076 easyblock.py:318 INFO Closing log for application name LAMMPS version 23Jun2022 |
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