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Fedor Velikonivtsev Abusagit

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ML, DL, Bioinformatics

Abusagit / gist:f91eb954667b9657ca8c4a207dc4c690

Created April 4, 2021 14:11 — forked from vladimirtsyupko/gist:10964772

Git force pull to overwrite local files

Abusagit / read_vcf.py

Created June 4, 2021 15:46 — forked from dceoy/read_vcf.py

[Python] Read VCF (variant call format) as pandas.DataFrame

	#!/usr/bin/env python

	import io
	import os
	import pandas as pd


	def read_vcf(path):
	with open(path, 'r') as f:
	lines = [l for l in f if not l.startswith('##')]

Abusagit / normalize_rows.py

Created September 16, 2022 21:55 — forked from f0nzie/normalize_rows.py

Normalize rows of a matrix by dividing rows by the normal of the matrix

	def normalizeRows(x):
	"""
	Implement a function that normalizes each row of the matrix x (to have unit length).

	Argument:
	x -- A numpy matrix of shape (n, m)

	Returns:
	x -- The normalized (by row) numpy matrix. You are allowed to modify x.
	"""