AndreyAkinshin

################################################################################
# A simulation of the following system:
#
# dm1/dt = -k1 * m1 + f1(p9)   dp1/dt = mu1 * m1 - nu1 * p1
# dm2/dt = -k2 * m2 + f2(p1)   dp2/dt = mu2 * m2 - nu2 * p2
# dm3/dt = -k3 * m3 + f3(p2)   dp3/dt = mu3 * m3 - nu3 * p3
# dm4/dt = -k1 * m1 + f1(p3)   dp4/dt = mu1 * m1 - nu1 * p4
# dm5/dt = -k2 * m2 + f2(p4)   dp5/dt = mu2 * m2 - nu2 * p5
# dm6/dt = -k3 * m3 + f3(p5)   dp6/dt = mu3 * m3 - nu3 * p6
# dm7/dt = -k1 * m1 + f1(p6)   dp7/dt = mu1 * m1 - nu1 * p7

AndreyAkinshin

################################################################################
# A simulation of the following system:
#
# dm1/dt = -k1 * m1 + f1(p5)   dp1/dt = mu1 * m1 - nu1 * p1
# dm2/dt = -k2 * m2 + f2(p1)   dp2/dt = mu2 * m2 - nu2 * p2
# dm3/dt = -k3 * m3 + f3(p2)   dp3/dt = mu3 * m3 - nu3 * p3
# dm4/dt = -k4 * m4 + f4(p3)   dp4/dt = mu4 * m4 - nu4 * p4
# dm5/dt = -k5 * m5 + f5(p4)   dp5/dt = mu5 * m5 - nu5 * p5
#
# Parameters: 

AndreyAkinshin

library(deSolve)
library(dplyr)
library(ggplot2)

# Model
f <- function(x) 258 / (1 + x ^ 7)
model <- function(t, state, parameters) {
  with(as.list(c(state)), {
    dx1 <- f(x5) - x1
    dx2 <- f(x1) - x2

AndreyAkinshin

################################################################################
# A simulation of the following system:
#
# dm1/dt = -k1 * m1 + f1(p3)   dp1/dt = mu1 * (m1 - p1)
# dm2/dt = -k2 * m2 + f2(p1)   dp2/dt = mu2 * (m2 - p2)
# dm3/dt = -k3 * m3 + f3(p2)   dp3/dt = mu3 * (m3 - p3)
#
# Parameters: 
#   k1  = 1.5   k2  = 1.7   k3  = 2.0
#   mu1 = 3.0   mu2 = 3.5   mu3 = 4.0

AndreyAkinshin

using System;
using System.Collections.Generic;
using System.Diagnostics;
using System.IO;
using System.Linq;

namespace NuGetUltimateBuilder
{
  // Requires nuget.exe >= v3.5.0-rc1
  internal class Program

AndreyAkinshin

  <Colors>
    <Foreground>12303291</Foreground>
    <Background>4276028</Background>
    <Background2>4276028</Background2>
    <Mark>33023</Mark>
    <Cursor>11497035</Cursor>
    <CursorText>-2147483634</CursorText>
    <UseInvertedSelection>False</UseInvertedSelection>
    <InactivePanelBrightness>100</InactivePanelBrightness>
    <UseFrameCursor>False</UseFrameCursor>

AndreyAkinshin

#NoEnv  ; Recommended for performance and compatibility with future AutoHotkey releases.
#SingleInstance force
; #Warn  ; Enable warnings to assist with detecting common errors.
SendMode Input  ; Recommended for new scripts due to its superior speed and reliability.
SetWorkingDir %A_ScriptDir%  ; Ensures a consistent starting directory.

SetCapsLockState, AlwaysOff

; Based on https://gist.github.com/ronjouch/2428558
; Variables definition

AndreyAkinshin

################################################################################
# A simulation of the Elowitz's repressilator.
#
# References
# * A Synthetic Oscillatory Network of Transcriptional Regulators; 
#   Michael Elowitz and Stanislas Leibler; Nature. 2000 Jan 20;403(6767):335-8.
#
# Author: Andrey Akinshin
################################################################################

AndreyAkinshin

using System;
using System.Diagnostics;
using System.Linq;

public static class JitModules
{
    public static void Main()
    {
        Console.WriteLine("OS: " + Environment.OSVersion.VersionString);
        Console.WriteLine("CLR: " + Environment.Version);

AndreyAkinshin

[alias]
  l = log --pretty=format:"%C(yellow)%h\\ %ad%Cred%d\\ %Creset%s%Cblue\\ [%cn]" --decorate --date=short
  lg = log --graph --date-order --pretty=format:'%C(bold blue)%h%C(reset) %C(bold green)[%an]%C(reset) %Cgreen%d%Creset %s, %C(yellow)%ad%C(reset)' --date=iso
  lgl = log --graph --date-order --pretty=format:'%C(bold blue)%h%C(reset) %C(bold green)[%an]%C(reset) %Cgreen%d%Creset %s, %C(yellow)%ad%C(reset)' --date=iso -10
  
  a = add
  ap = add -p
  c = commit --verbose
  ca = commit -a --verbose
  cm = commit -m