Buttonwood

// #=============================================================================
// #     FileName: fastqdup.cpp
// #         Desc: A short program for duplication reads statistics.
// #       Author: tanhao
// #        Email: tanhao2013@gmail.com
// #     HomePage: http://buttonwood.github.io
// #      Version: 0.0.1
// #   LastChange: 2014-04-15 10:37:49
// #      History:
// #=============================================================================

Buttonwood

'''
#=============================================================================
#     FileName: gc_dp_pip.py
#         Desc: A script for gc content and coverage statistics by windows;
#               a genome fasta file and soap coverage file needs.
#       Author: tanhao
#        Email: tanhao2013@gmail.com
#     HomePage: http://buttonwood.github.io
#      Version: 0.0.1
#   LastChange: 2014-04-14 15:29:14

Buttonwood

#=============================================================================
#     FileName: cegma_train.sh
#         Desc: A short script for training a cegma annotation for SNP hmm set!
#       Author: tanhao
#        Email: tanhao2013@gmail.com
#     HomePage: http://buttonwood.github.io
#      Version: 0.0.1
#   LastChange: 2014-03-21 10:13:08
#      History:
#=============================================================================

Buttonwood

when you are old and gray and full of sleep,
And nodding by the fire,take down this book,
And slowly read,and dream of the soft look,
Your eyes had once,and of their shadows deep.
How many loved your moments of glad grace,
And loved your beauty with love false or true,
But one man loved the pilgrim soul in you,
And loved the sorrows of your changing face.
And bending down beside the glowing bars,
Murmur,a little sadly,how love fled,

Buttonwood

import argparse
import re
import urllib

def getHtml(url):
	page = urllib.urlopen(url)
	html = page.read()
	return html

def getImg(html):

Buttonwood

<snippet>
	<content><![CDATA[
#!/usr/bin/env python
# -*- coding: UTF-8 -*-

"""	
	@File:      
	@Author: Hao Tan
	@Date:     
	@Email:  tanhao2013@foxmail.com

Buttonwood

import os, Queue, threading, urllib2
class DownLoadThread(threading.Thread):
	"""docstring for DownLoadThread"""
	def __init__(self, queue):
		#super(DownLoadThread, self).__init__()
		threading.Thread.__init__(self)
		self.queue = queue

	def run(self):
		while True:

Buttonwood

if [  $# != 3 ]; then
        echo "Usage: sh $0 id table old.sql | sh "
        echo "This script will change the raw sql file directly."
        echo "Please make sure you have a backup for checking!"
        exit
fi

echo cp $3 ${3}.bak

tmp=$(($1 * 8))

Buttonwood

#!/usr/bin/env python
# -*- coding: UTF-8 -*-

"""
	@File:      pxssh-test.py
	@Author: Hao Tan
	@Date:    2014-08-08
	@Email:   tanhao2013@foxmail.com
	@Desc:   A test script for batch monitoring hundreds of servers.
"""

Buttonwood

# perl phaser_cobar_action.pl stdout.log.2014-09-02 > actions.tab

my %pool;
my %count;
my $action;
my $action_text;
my %all;
my %route;