ChristopherDavenport

    def reverse[A](as: List[A]): List[A] = {
    foldLeft(as, List[A]())((acc, x) => x::acc)
  }
  
  def foldRightFromFoldLeft[A,B](as: List[A], z:B)(f:(B, A) => B):B ={
    foldLeft(reverse(as), z)((onlyNil, x) =>f(onlyNil, x) )
  }
  
  // The Problem Child
  // Type checker has a problem with both x.toString :: onlyNil or as seen below.

ChristopherDavenport

FROM gliderlabs/alpine:latest
MAINTAINER Christopher Davenport <[email protected]>

ENV JAVA_VERSION=7 \
    JAVA_UPDATE=79 \
    JAVA_BUILD=15 \
    JAVA_HOME=/usr/lib/jvm/default-jvm \
    PATH=${PATH}:${JAVA_HOME}/bin

RUN apk add --update wget ca-certificates dnsmasq && \

ChristopherDavenport

#Vagrantfile AP/sytnax version
VAGRANTFILE_API_VERSION = "2"

$script = <<SCRIPT
yum install -y wget

#JAVA
wget --no-check-certificate --no-cookies --head "Cookie: oraclelicense=accept-securebackup-cookie" http://download.oracle.com/otn-pub/java/jdk/8u74-b02/jdk-8u74-linux-x64.rpm
yum localinstall -y jdk-8u74-linux-x64.rpm
rm -f jdk-8u74-linux-x64.rpm

ChristopherDavenport

sqlserver = {
  driver = "com.typesafe.slick.driver.ms.SQLServerDriver$"
  db {
    driver = "com.microsoft.sqlserver.jdbc.SQLServerDriver"
    host = ""
    port = ""
    databaseName = ""

    url = "jdbc:sqlserver://"${sqlserver.db.host}":"${sqlserver.db.port}";databaseName="${sqlserver.db.databaseName}
    user = ""

ChristopherDavenport

    def deleteGroupsExample(currentGoogleGroups: Seq[Group]) = {
      val set: Set[String] = currentGoogleGroups.map(_.id.get).toSet
      db.run(googleGroups.result).flatMap { groups =>
        Future.sequence{
          groups.withFilter( group => !set.contains(group.id))
            .map{ group =>
              db.run(queryGoogleGroupsTableById(group.id).delete)
            }
        }
      }

ChristopherDavenport

CREATE TABLE NCBI_Annotation
(
  UnigeneID   VARCHAR(32) PRIMARY KEY NOT NULL,
  Description VARCHAR(255)            NOT NULL,
  ProteinsPID VARCHAR(32)             NOT NULL
);

CREATE TABLE Proteins
(
  PID       VARCHAR(32) PRIMARY KEY NOT NULL,

ChristopherDavenport

#!/bin/bash
 
 # This script moves to recompile all of the Banner Jobsub components.
 
 
 # This function executes the file if it exists.
 function ifFileExistsExecute(){
   if [ -f "$1" ]; then
     if  $1 ; then
       echo "$1 compiled"

ChristopherDavenport

 Saved For Posterity    
    val futurePidmXor: Future[Xor[MissingPersonContact, BigDecimal]] = convertedContact
      .bimap(Future.successful, x => pidmResponder(x.BannerID))
      .bisequence
      .map(_.flatMap(Xor.fromOption(_, missingPersonContact)))

ChristopherDavenport

- name: Install Something and Uninstall something else
  yum:
    name={{ item.name }}
    state={{ item.state | default(present) }}
  with_items:
  - { name: 'program1', state: 'latest' }
  - { name: 'program2'}
  - { name: 'program3', state: 'absent' }

ChristopherDavenport

type ID[A] = A