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FrancescAlted / Estimating-Pi-ironArray.py
Last active September 12, 2022 08:11
Estimating the value of Pi for an ironArray blog (https://medium.com/p/bd4b08b799a8)
import numpy as np
import iarray as ia
from iarray import udf
import math
# Params for array construction
shape = (40_000, 40_000)
ia.set_config_defaults(dtype=np.float32, fp_mantissa_bits=15)
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FrancescAlted / read-binary-data.py
Created August 27, 2022 08:26
Benchmark comparing npy, npz, jdb and blosc2 storage formats
# Benchmark comparing npy, npz, jdb and blosc2 storage formats
import sys
import numpy as np
import jdata as jd
import blosc2
from time import time
N = 10_000
# Examples on getting orthogonal slices
import iarray as ia
import numpy as np
dtype = np.float32
ia.set_config_defaults(dtype=dtype)
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FrancescAlted / udf_expr.py
Created May 10, 2022 10:54
Calling UDFs from expressions
# Calling scalar UDFs from expressions.
# This is for 1-dim arrays.
from time import time
import numpy as np
import iarray as ia
from iarray import udf
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c = ia.matmul(am, bm)
from iarray.udf import jit, Array, float64, int64
# Create second array via an UDF
@jit()
def tri(out: Array(float64, 2), x: Array(float64, 2), k: int64) -> int64:
n = out.window_shape[0]
m = out.window_shape[1]
row_start = out.window_start[0]
col_start = out.window_start[1]
for i in range(n):
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FrancescAlted / ia-matmul-excerpt2.py
Created March 15, 2022 08:24
Actual iarray matmul call
# Random values with lossy compression to get some decent compression ratio
am = ia.random.normal(amshape, 3, 2, chunks=amchunks, blocks=amblocks, urlpath=filename, fp_mantissa_bits=10)
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FrancescAlted / ia-matmul-excerpt1.py
Last active March 15, 2022 08:20
Matmul with ironArray (preparation)
nrows = 100_000 # number of rows in matrix am
ncols = 25000 # number of columns in first matrix
ncols2 = 1000 # number of columns in second matrix
shape = (nrows, ncols, ncols2)
amshape = (shape[0], shape[1])
bmshape = (shape[1], shape[2])
# Obtain optimal chunk and block shapes
mparams = ia.matmul_params(amshape, bmshape, dtype=np.float64)