IsmailM / projects.js

Last active April 9, 2017 17:43

	var fs = require('fs')
	var through = require('through2')
	var pumpify = require('pumpify')
	var request = require('request')

	var APIROOT = 'https://api.github.com/'
	var TOKEN = ''

	var getProjects = function (org, cb) {
	var stream = pumpify.obj(

IsmailM / streams.js

Last active April 7, 2017 15:09

Trying to get streams to work

	var through = require('through2');
	var pumpify = require('pumpify');
	var request = require('request');

	var getProjects = function(cb) {
	var stream = pumpify.obj(
	ex('hello'),
	sendRequest() // Returns a JSON object
	)
	return stream

IsmailM / sublime.json

Last active May 30, 2017 18:33

	{
	"additional_path_items":
	[
	"/Users/ismailm/.nvm/versions/node/v6.3.0/bin"
	],
	"always_show_minimap_viewport": true,
	"bold_folder_labels": true,
	"color_scheme": "Packages/User/SublimeLinter/Sunburst (SL).tmTheme",
	"detect_indentation": false,
	"font_face": "Operator Mono Book",

IsmailM / prompt_agnoster_setup

Created March 30, 2017 12:57

prompt_agnoster_setup for yadr theme

	# vim:ft=zsh ts=2 sw=2 sts=2
	#
	# agnoster's Theme - https://gist.github.com/3712874
	# A Powerline-inspired theme for ZSH
	#
	# # README
	#
	# In order for this theme to render correctly, you will need a
	# [Powerline-patched font](https://gist.github.com/1595572).
	#

IsmailM / .zshrc

Last active March 6, 2018 13:53

My zshrc

	prompt agnoster

	### Add Key bindings
	bindkey '^[[1;5C' forward-word # [Ctrl-RightArrow] - move forward one word
	bindkey '^[[1;5D' backward-word # [Ctrl-LeftArrow] - move backward one word

	# Make the delete key (or Fn + Delete on the Mac) work instead of outputting a ~
	bindkey '^?' backward-delete-char # [Delete] - delete backward
	bindkey '^[[3~' delete-char # [fn-Delete] - delete forward
	bindkey '^[3;5~' delete-char

IsmailM / analysis.sh

Last active March 31, 2017 16:54

exemplar chrom 10 vep

	#!/usr/bin/env bash
	set -ex

	# DIRECTORIES
	VEP=$HOME/data/.progz/ensembl-vep/vep

	ANALYSIS_DIR=$HOME/data/analysis
	### VEP Custom Annotation
	DBSNP_DB=${ANALYSIS_DIR}/dbsnp/dbsnp149.vcf.gz
	KAVIAR_DB=${ANALYSIS_DIR}/kaviar/Kaviar-160204-Public-hg19.vcf.gz

IsmailM / analyse1.sh

Last active March 27, 2017 17:03

	# DIRECTORIES
	VEP=$HOME/data/.progz/ensembl-vep/vep.pl

	ANALYSIS_DIR=$HOME/data/analysis
	### VEP --ASSEMBLY param
	ASSEMBLY_FASTA=${ANALYSIS_DIR}/reference/human_g1k_v37_decoy.fasta
	### VEP Custom Annotation
	DBSNP_DB=${ANALYSIS_DIR}/dbsnp/All_20161121.vcf.gz
	KAVIAR_DB=${ANALYSIS_DIR}/kaviar/VEP_annotation.vcf.gz
	GNOMAD_DIR=${ANALYSIS_DIR}/gnomad

IsmailM / tmux-cheatsheet.markdown

Created March 14, 2017 15:35 — forked from MohamedAlaa/tmux-cheatsheet.markdown

tmux shortcuts & cheatsheet

start new:

tmux

start new with session name:

tmux new -s myname

IsmailM / Open Safari tabs in Google Chrome

Created February 22, 2017 00:29 — forked from martinwinter/Open Safari tabs in Google Chrome

Opens all Safari windows and tabs in Google Chrome.

	tell application "Safari"
	repeat with theSafariWindow in windows
	tell application "Google Chrome" to set theChromeWindow to make new window
	repeat with theSafariTab in theSafariWindow's tabs
	set theURL to URL of theSafariTab
	tell application "Google Chrome"
	set theChromeTab to make new tab at end of tabs of theChromeWindow
	set URL of theChromeTab to theURL
	end tell
	end repeat

IsmailM / Kaviar-160204-Public-hg19.txt

Last active February 20, 2017 15:01

1	52727	rs2691278	C	G	.	.	AF=0.1048980;AC=2767;AN=26378;DS=GS000009920|GS000009927|GS000009928|GS000009930|GS000009931|GS000009932|GS000010320|GS000010321|GS000010322|GS000010323|GS000010327|GS000010328|GS000010424|GS000010425|GS000010426|GS000010427|GS000010428|GS000010429|GS000010430|GS000010431|GS000010432|GS000010433|GS000010434|GS000010435|GS000010436|GS000010437|GS000010438|GS000010494|GS000011735|GS000011738|GS000011739|GS000011740|GS000011741|GS000011761|GS000011804|GS000011805|GS000011807|GS000011808|GS000011809|GS000011810|GS000011811|GS000011812|GS000011814|GS000011816|GS000012712|GS000012713|GS000013164|GS000014557|GS000014558|GS000014559|GS000014560|GS000014561|GS000014562|GS000014563|GS000014564|GS000014566|GS000014567|GS000014568|GS000014569|GS000014570|GS000015152|GS000015153|GS000015154|GS000015155|GS000015156|GS000015172|GS000015173|GS000015174|GS000015175|GS000015176|GS000015178|GS000015180|GS000015181|GS000015182|GS000015183|GS000015184|GS000015186|GS000015187|GS000015188|GS000015189|GS000

Ismail Moghul IsmailM

tmux shortcuts & cheatsheet