Jasper J.F. van den Bosch JasperVanDenBosch

Cognitive Neuroscientist

JasperVanDenBosch / captions.py

Created November 30, 2023 16:08

Add caption to image

	"""Add a text label to an image

	Uses Pillow, install with `pip install pillow`
	"""
	from os.path import expanduser, join, basename
	from glob import glob
	from PIL import Image, ImageDraw, ImageFont

	## full path to your image directory, ~ = your home directory
	img_dir = expanduser('~/stimuli/nsd/special100')

JasperVanDenBosch / discover_openneuro_fmriprep.py

Created June 20, 2022 18:53

Find openneuro datasets that have fmriprep results

	"""Find openneuro datasets that have an fmriprep derivative

	This is a fairly brute-force method. Takes about one hour, and 8GB of HD space.

	requirements:
	datalad
	pandas
	requests

	"""

JasperVanDenBosch / ssp log

Created December 8, 2014 20:44

SSP log after mnefun PR with specific EOG channel


	Applying baseline correction ... (mode: mean)
	Applying baseline correction ... (mode: mean)
	5 bad epochs dropped
	Loading and filtering 1 files.
	Opening raw data file /diskArray/data/clj/zc/sss_fif/zc_clj_01_raw_sss.fif...
	Current compensation grade : 0
	Range : 26000 ... 941999 = 26.000 ... 941.999 secs
	Ready.
	Reading 0 ... 915999 = 0.000 ... 915.999 secs...

JasperVanDenBosch / gist:10302181

Created April 9, 2014 18:47

output_of_python-v.txt

	# installing zipimport hook
	import zipimport # builtin
	# installed zipimport hook
	# /usr/lib/python2.7/site.pyc matches /usr/lib/python2.7/site.py
	import site # precompiled from /usr/lib/python2.7/site.pyc
	# /usr/lib/python2.7/os.pyc matches /usr/lib/python2.7/os.py
	import os # precompiled from /usr/lib/python2.7/os.pyc
	import errno # builtin
	import posix # builtin
	# /usr/lib/python2.7/posixpath.pyc matches /usr/lib/python2.7/posixpath.py

JasperVanDenBosch / pip-freeze.txt

Created April 9, 2014 18:38

attachments for matplotlib issue #2963 Segmentation Fault on adding BBoxImage to matshow

JasperVanDenBosch / version.py

Created May 1, 2012 13:02 — forked from dcreager/version.py

Extract a setuptools version from the git repository: adapted for PEP 386

	# -- coding: utf-8 --
	# Author: Douglas Creager <[email protected]>
	# This file is placed into the public domain.

	# Calculates the current version number. If possible, this is the
	# output of “git describe”, modified to conform to the versioning
	# scheme that setuptools uses. If “git describe” returns an error
	# (most likely because we're in an unpacked copy of a release tarball,
	# rather than in a git working copy), then we fall back on reading the
	# contents of the RELEASE-VERSION file.

JasperVanDenBosch / fexpect.py

Created March 6, 2012 19:18

Now a full repo see: https://github.com/ilogue/fexpect

	# fabric extension to enable handling expected prompts
	#
	# Read more at http://ilogue.com/jasper/blog/fexpect--dealing-with-prompts-in-fabric-with-pexpect/
	#
	# This file Copyright (c) Jasper van den Bosch, ilogue, [email protected]
	# Pexpect Copyright (c) 2012 Noah Spurrier ,see: http://www.noah.org/wiki/pexpect#License


	from fabric.state import env
	import fabric.api