Lee Bergstrand LeeBergstrand
LeeBergstrand
/ Linuxbrew_Config.yml
Last active
September 29, 2021 09:20
CircleCi config for homebrew
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| version: 2 | |
| jobs: | |
| build: | |
| working_directory: ~/repo | |
| machine: true | |
| steps: | |
| - checkout |
LeeBergstrand
/ C_chlorochromatii_CaD3.tsv
Created
January 9, 2019 01:57
Genome Properties Assignment Bug (Issue 30)
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| NC_007514.1_1800 2da1d06b2f7f511868a9c2917777ab82 498 Pfam PF12183 Restriction endonuclease NotI 231 461 7.8E-98 T 14-05-2018 IPR022009 Restriction endonuclease, type II, NotI | |
| NC_007514.1_1661 c1968ae7cab9a5d53947002f3518f2c2 247 Pfam PF02585 GlcNAc-PI de-N-acetylase 11 127 4.3E-21 T 14-05-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 | |
| NC_007514.1_1661 c1968ae7cab9a5d53947002f3518f2c2 247 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 8 235 1.9E-96 T 14-05-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 | |
| NC_007514.1_1661 c1968ae7cab9a5d53947002f3518f2c2 247 PANTHER PTHR12993:SF21 11 232 2.8E-49 T 14-05-2018 | |
| NC_007514.1_1661 c1968ae7cab9a5d53947002f3518f2c2 247 PANTHER PTHR12993 11 232 2.8E-49 T 14-05-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 | |
| NC_007514.1_1652 87cd3c15562a2ce4954e59e9d87f2ae8 404 Pfam PF01747 ATP-sulfurylase 175 385 1. |
LeeBergstrand
/ sanitize_interproscan_tsv.py
Created
February 13, 2021 06:12
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| #!/usr/bin/env python3 | |
| """ | |
| Created by: Lee Bergstrand | |
| Description: Makes newer InterProScan TSV file compatible with Pygenprop. | |
| Requirements: None | |
| """ |
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