To use this code, pop index.php and searchwp-members.php into a directory named searchwp-members,
zip it up with zip -r searchwp-members.zip searchwp-members, and install the zip file in wordpress.
It works with ajax live search also.
Mike Dacre MikeDacre
MikeDacre
/ format_alleleseq_output.py
Created
December 15, 2015 01:08
Format the output of the alleleseq pipeline into gene and snp level tab-delimited outputs sorted by tissue
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/usr/bin/env python3 | |
| # -*- coding: utf-8 -*- | |
| # vim:fenc=utf-8 tabstop=4 expandtab shiftwidth=4 softtabstop=4 | |
| """ | |
| #============================================================================# | |
| # # | |
| # AUTHOR: Michael D Dacre, [email protected] # | |
| # ORGANIZATION: Stanford University # | |
| # LICENSE: MIT License, property of Stanford, use as you wish # | |
| # CREATED: 2015-12-13 10:07 # |
MikeDacre
/ python.snippets
Last active
June 29, 2024 18:15
UltiSnips: Add import to top of file with other imports
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| global !p | |
| def first_blank_line(): | |
| """ Search current vim buffer for first blank line. If not found return current line """ | |
| b = snip.buffer | |
| index = 0 | |
| break_index = 100 | |
| com_delim = re.compile(r'^(\s+)?(""")') | |
| in_comment = False | |
| for line in b: | |
| index += 1 |
MikeDacre
/ slurm_trap.sh
Last active
February 26, 2016 19:05
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/bin/bash | |
| #SBATCH --partition=<partition> | |
| #SBATCH --time=00:02:00 | |
| #SBATCH --nodes=1 | |
| #SBATCH --ntasks-per-node=1 | |
| #SBATCH --signal=b:USR1@10 | |
| trap_with_arg() { | |
| func="$1" ; shift |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/bin/bash | |
| #SBATCH --partition=hbfraser | |
| #SBATCH --time=00:02:00 | |
| #SBATCH --nodes=1 | |
| #SBATCH --ntasks-per-node=1 | |
| #SBATCH --signal=36@30 | |
| #----------------------------- Set up DMTCP environment for a job ------------# | |
| ############################################################################### |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| def job_runner(jobqueue, outputs, cores=1, jobno=1): | |
| """ | |
| jobs: [(command, args)] | |
| outputs: {id: retval} | |
| """ | |
| import sys | |
| def output(out): | |
| """Let's try and explicitly clear the dictionary before sending the output.""" | |
| lastout = outputs.get() if not outputs.empty() else '' | |
| if out == lastout: |
MikeDacre
/ public_api.patch
Created
April 27, 2016 22:50
Patch for Private Content mail function to make wp_mail() default when it is supposed to be.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| --- public_api.php.orig 2016-04-27 15:45:37.237260404 -0700 | |
| +++ public_api.php 2016-04-27 15:44:53.737239447 -0700 | |
| @@ -37,7 +37,7 @@ | |
| // switch between PHPmailer and basic PHP mail() function | |
| - if(get_option('pcma_use_basic_func')) { | |
| + if(! get_option('pcma_use_basic_func')) { | |
| $headers = "From: ".$from_name." <".strip_tags($from_mail).">\r\n"; |
MikeDacre
/ private-content-secure-links.patch
Created
April 27, 2016 22:59
Fix spelling mistake in Private Content Secure Links
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| diff -Naur private-content-secure-links-orig/languages/default.pot private-content-secure-links/languages/default.pot | |
| --- private-content-secure-links-orig/languages/default.pot 2016-04-27 15:54:24.384194707 -0700 | |
| +++ private-content-secure-links/languages/default.pot 2016-04-27 15:55:15.757552727 -0700 | |
| @@ -120,7 +120,7 @@ | |
| msgstr "" | |
| #: ../links_manager.php:28 | |
| -msgid "An user category" | |
| +msgid "A user category" | |
| msgstr "" |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| diff -Naur private-content.orig/functions.php private-content/functions.php | |
| --- private-content.orig/functions.php 2016-04-29 15:42:09.587388342 -0700 | |
| +++ private-content/functions.php 2016-04-29 15:57:32.032192704 -0700 | |
| @@ -266,8 +266,8 @@ | |
| if($bulk_opts) { | |
| $opts['pc_cats']['opts'] = array( | |
| - 'all' => __('Any logged user', 'pc_ml'), | |
| - 'unlogged' => __('Unlogged Users', 'pc_ml'), | |
| + 'all' => __('Any logged in user', 'pc_ml'), |
MikeDacre
/ .python-cluster
Created
September 7, 2016 22:04
Python Cluster profile for sherlock cluster
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| [opts] | |
| queue = hbfraser | |
| [queue] | |
| max_jobs = 1000 | |
| sleep_len = 2 | |
| queue_update = 5 | |
| [prof_default] | |
| cores = 1 |