Dropbox (Smithsonian)/Dashboard/bwp_fims_counts.ipynb

BWP FIMS Counts.ipynb

{
  "cells": [
    {
      "metadata": {
        "trusted": true
      },
      "cell_type": "code",
      "source": "import biocode_fims",
      "execution_count": 1,
      "outputs": []
    },
    {
      "metadata": {
        "trusted": true
      },
      "cell_type": "code",
      "source": "all_projects = biocode_fims.list_projects()",
      "execution_count": 2,
      "outputs": [
        {
          "output_type": "error",
          "ename": "SSLError",
          "evalue": "HTTPSConnectionPool(host='biscicol.org', port=443): Max retries exceeded with url: /biocode-fims/rest/v1.1/projects/?includePublic=true (Caused by SSLError(CertificateError(\"hostname 'biscicol.org' doesn't match either of 'www.biscicol.org', 'www.data.oceanarms.org'\",),))",
          "traceback": [
            "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
            "\u001b[0;31mCertificateError\u001b[0m                          Traceback (most recent call last)",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connectionpool.py\u001b[0m in \u001b[0;36murlopen\u001b[0;34m(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)\u001b[0m\n\u001b[1;32m    600\u001b[0m                                                   \u001b[0mbody\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mbody\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mheaders\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mheaders\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 601\u001b[0;31m                                                   chunked=chunked)\n\u001b[0m\u001b[1;32m    602\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connectionpool.py\u001b[0m in \u001b[0;36m_make_request\u001b[0;34m(self, conn, method, url, timeout, chunked, **httplib_request_kw)\u001b[0m\n\u001b[1;32m    345\u001b[0m         \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 346\u001b[0;31m             \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_validate_conn\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mconn\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    347\u001b[0m         \u001b[0;32mexcept\u001b[0m \u001b[0;34m(\u001b[0m\u001b[0mSocketTimeout\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mBaseSSLError\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connectionpool.py\u001b[0m in \u001b[0;36m_validate_conn\u001b[0;34m(self, conn)\u001b[0m\n\u001b[1;32m    849\u001b[0m         \u001b[0;32mif\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0mgetattr\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mconn\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m'sock'\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m  \u001b[0;31m# AppEngine might not have  `.sock`\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 850\u001b[0;31m             \u001b[0mconn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mconnect\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    851\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connection.py\u001b[0m in \u001b[0;36mconnect\u001b[0;34m(self)\u001b[0m\n\u001b[1;32m    345\u001b[0m                 )\n\u001b[0;32m--> 346\u001b[0;31m             \u001b[0m_match_hostname\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcert\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0massert_hostname\u001b[0m \u001b[0;32mor\u001b[0m \u001b[0mhostname\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    347\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connection.py\u001b[0m in \u001b[0;36m_match_hostname\u001b[0;34m(cert, asserted_hostname)\u001b[0m\n\u001b[1;32m    355\u001b[0m     \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 356\u001b[0;31m         \u001b[0mmatch_hostname\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcert\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0masserted_hostname\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    357\u001b[0m     \u001b[0;32mexcept\u001b[0m \u001b[0mCertificateError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/ssl.py\u001b[0m in \u001b[0;36mmatch_hostname\u001b[0;34m(cert, hostname)\u001b[0m\n\u001b[1;32m    320\u001b[0m             \u001b[0;34m\"doesn't match either of %s\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 321\u001b[0;31m             % (hostname, ', '.join(map(repr, dnsnames))))\n\u001b[0m\u001b[1;32m    322\u001b[0m     \u001b[0;32melif\u001b[0m \u001b[0mlen\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mdnsnames\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;34m==\u001b[0m \u001b[0;36m1\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;31mCertificateError\u001b[0m: hostname 'biscicol.org' doesn't match either of 'www.biscicol.org', 'www.data.oceanarms.org'",
            "\nDuring handling of the above exception, another exception occurred:\n",
            "\u001b[0;31mMaxRetryError\u001b[0m                             Traceback (most recent call last)",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/adapters.py\u001b[0m in \u001b[0;36msend\u001b[0;34m(self, request, stream, timeout, verify, cert, proxies)\u001b[0m\n\u001b[1;32m    439\u001b[0m                     \u001b[0mretries\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmax_retries\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 440\u001b[0;31m                     \u001b[0mtimeout\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtimeout\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    441\u001b[0m                 )\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/connectionpool.py\u001b[0m in \u001b[0;36murlopen\u001b[0;34m(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)\u001b[0m\n\u001b[1;32m    638\u001b[0m             retries = retries.increment(method, url, error=e, _pool=self,\n\u001b[0;32m--> 639\u001b[0;31m                                         _stacktrace=sys.exc_info()[2])\n\u001b[0m\u001b[1;32m    640\u001b[0m             \u001b[0mretries\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msleep\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/urllib3/util/retry.py\u001b[0m in \u001b[0;36mincrement\u001b[0;34m(self, method, url, response, error, _pool, _stacktrace)\u001b[0m\n\u001b[1;32m    387\u001b[0m         \u001b[0;32mif\u001b[0m \u001b[0mnew_retry\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_exhausted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 388\u001b[0;31m             \u001b[0;32mraise\u001b[0m \u001b[0mMaxRetryError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0m_pool\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0murl\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0merror\u001b[0m \u001b[0;32mor\u001b[0m \u001b[0mResponseError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcause\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    389\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;31mMaxRetryError\u001b[0m: HTTPSConnectionPool(host='biscicol.org', port=443): Max retries exceeded with url: /biocode-fims/rest/v1.1/projects/?includePublic=true (Caused by SSLError(CertificateError(\"hostname 'biscicol.org' doesn't match either of 'www.biscicol.org', 'www.data.oceanarms.org'\",),))",
            "\nDuring handling of the above exception, another exception occurred:\n",
            "\u001b[0;31mSSLError\u001b[0m                                  Traceback (most recent call last)",
            "\u001b[0;32m<ipython-input-2-6c6624bcfab2>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mall_projects\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mbiocode_fims\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mlist_projects\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/biocode_fims/biocode_fims.py\u001b[0m in \u001b[0;36mlist_projects\u001b[0;34m(format)\u001b[0m\n\u001b[1;32m     10\u001b[0m     \u001b[0mparams\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m{\u001b[0m\u001b[0;34m'includePublic'\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0;34m'true'\u001b[0m\u001b[0;34m}\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     11\u001b[0m     \u001b[0mproject_list_url\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mAPI_BASE\u001b[0m \u001b[0;34m+\u001b[0m \u001b[0;34m'projects/'\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 12\u001b[0;31m     \u001b[0mr\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mrequests\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mproject_list_url\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mparams\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mparams\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     13\u001b[0m     \u001b[0mall_projects\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mr\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mjson\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     14\u001b[0m     \u001b[0;32mif\u001b[0m \u001b[0mformat\u001b[0m \u001b[0;34m==\u001b[0m \u001b[0;34m'raw'\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/api.py\u001b[0m in \u001b[0;36mget\u001b[0;34m(url, params, **kwargs)\u001b[0m\n\u001b[1;32m     70\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     71\u001b[0m     \u001b[0mkwargs\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msetdefault\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'allow_redirects'\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;32mTrue\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 72\u001b[0;31m     \u001b[0;32mreturn\u001b[0m \u001b[0mrequest\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'get'\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0murl\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mparams\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mparams\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     73\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     74\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/api.py\u001b[0m in \u001b[0;36mrequest\u001b[0;34m(method, url, **kwargs)\u001b[0m\n\u001b[1;32m     56\u001b[0m     \u001b[0;31m# cases, and look like a memory leak in others.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     57\u001b[0m     \u001b[0;32mwith\u001b[0m \u001b[0msessions\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mSession\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0msession\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 58\u001b[0;31m         \u001b[0;32mreturn\u001b[0m \u001b[0msession\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mrequest\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0murl\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0murl\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     59\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     60\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/sessions.py\u001b[0m in \u001b[0;36mrequest\u001b[0;34m(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)\u001b[0m\n\u001b[1;32m    506\u001b[0m         }\n\u001b[1;32m    507\u001b[0m         \u001b[0msend_kwargs\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mupdate\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0msettings\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 508\u001b[0;31m         \u001b[0mresp\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msend\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mprep\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0msend_kwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    509\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    510\u001b[0m         \u001b[0;32mreturn\u001b[0m \u001b[0mresp\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/sessions.py\u001b[0m in \u001b[0;36msend\u001b[0;34m(self, request, **kwargs)\u001b[0m\n\u001b[1;32m    638\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    639\u001b[0m         \u001b[0;31m# Resolve redirects if allowed.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 640\u001b[0;31m         \u001b[0mhistory\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0mresp\u001b[0m \u001b[0;32mfor\u001b[0m \u001b[0mresp\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mgen\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mallow_redirects\u001b[0m \u001b[0;32melse\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    641\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    642\u001b[0m         \u001b[0;31m# Shuffle things around if there's history.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/sessions.py\u001b[0m in \u001b[0;36m<listcomp>\u001b[0;34m(.0)\u001b[0m\n\u001b[1;32m    638\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    639\u001b[0m         \u001b[0;31m# Resolve redirects if allowed.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 640\u001b[0;31m         \u001b[0mhistory\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0mresp\u001b[0m \u001b[0;32mfor\u001b[0m \u001b[0mresp\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mgen\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mallow_redirects\u001b[0m \u001b[0;32melse\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    641\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    642\u001b[0m         \u001b[0;31m# Shuffle things around if there's history.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/sessions.py\u001b[0m in \u001b[0;36mresolve_redirects\u001b[0;34m(self, resp, req, stream, timeout, verify, cert, proxies, yield_requests, **adapter_kwargs)\u001b[0m\n\u001b[1;32m    216\u001b[0m                     \u001b[0mproxies\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mproxies\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    217\u001b[0m                     \u001b[0mallow_redirects\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mFalse\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 218\u001b[0;31m                     \u001b[0;34m**\u001b[0m\u001b[0madapter_kwargs\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    219\u001b[0m                 )\n\u001b[1;32m    220\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/sessions.py\u001b[0m in \u001b[0;36msend\u001b[0;34m(self, request, **kwargs)\u001b[0m\n\u001b[1;32m    616\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    617\u001b[0m         \u001b[0;31m# Send the request\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 618\u001b[0;31m         \u001b[0mr\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0madapter\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msend\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mrequest\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    619\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    620\u001b[0m         \u001b[0;31m# Total elapsed time of the request (approximately)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m~/miniconda3/envs/python36/lib/python3.6/site-packages/requests/adapters.py\u001b[0m in \u001b[0;36msend\u001b[0;34m(self, request, stream, timeout, verify, cert, proxies)\u001b[0m\n\u001b[1;32m    504\u001b[0m             \u001b[0;32mif\u001b[0m \u001b[0misinstance\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0me\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mreason\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0m_SSLError\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    505\u001b[0m                 \u001b[0;31m# This branch is for urllib3 v1.22 and later.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 506\u001b[0;31m                 \u001b[0;32mraise\u001b[0m \u001b[0mSSLError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0me\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mrequest\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mrequest\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    507\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    508\u001b[0m             \u001b[0;32mraise\u001b[0m \u001b[0mConnectionError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0me\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mrequest\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mrequest\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;31mSSLError\u001b[0m: HTTPSConnectionPool(host='biscicol.org', port=443): Max retries exceeded with url: /biocode-fims/rest/v1.1/projects/?includePublic=true (Caused by SSLError(CertificateError(\"hostname 'biscicol.org' doesn't match either of 'www.biscicol.org', 'www.data.oceanarms.org'\",),))"
          ]
        }
      ]
    },
    {
      "metadata": {
        "trusted": true
      },
      "cell_type": "code",
      "source": "",
      "execution_count": null,
      "outputs": []
    }
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  "metadata": {
    "kernelspec": {
      "name": "python3",
      "display_name": "Python 3",
      "language": "python"
    },
    "language_info": {
      "name": "python",
      "version": "3.6.2",
      "mimetype": "text/x-python",
      "codemirror_mode": {
        "name": "ipython",
        "version": 3
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      "pygments_lexer": "ipython3",
      "nbconvert_exporter": "python",
      "file_extension": ".py"
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    "gist": {
      "id": "",
      "data": {
        "description": "Dropbox (Smithsonian)/Dashboard/bwp_fims_counts.ipynb",
        "public": true
      }
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  "nbformat": 4,
  "nbformat_minor": 2
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