Ruhshan

library("seqinr")
getncbiseq <- function(accession)
{
  require("seqinr") # this function requires the SeqinR R package
  # first find which ACNUC database the accession is stored in:
  dbs <- c("genbank","refseq","refseqViruses","bacterial")
  numdbs <- length(dbs)
  for (i in 1:numdbs)
  {
    db <- dbs[i]

Ruhshan

cycler==0.10.0
Django==2.0.1
django-cors-headers==2.1.0
django-extensions==1.9.9
imutils==0.4.5
matplotlib==2.1.2
numpy==1.13.3
opencv-python==3.3.1.11
pandas==0.22.0
Pillow==5.0.0

Ruhshan

from django.conf import settings
from demoapp import models

def RequestExposerMiddleware(get_response):
    def middleware(request):
        models.exposed_request = request
        response = get_response(request)
        return response

return middleware

Ruhshan

BLASTN 2.7.1+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: cad_res_partial

Ruhshan

import unittest
from mycodes import *

class MyTests(unittest.TestCase):
   ##your playground starts
   def yourtest(self):
       pass
   ##your playground ends

if __name__=="__main__":

Ruhshan

import unittest
from mycodes import *

class MyTests(unittest.TestCase):
   ##your playground starts
   def test_hello(self):
       self.assertEqual(hello('John'), 'Happy testing! John')
   ##your playground ends

if __name__=="__main__":

Ruhshan

E
======================================================================
ERROR: test_hello (__main__.MyTests)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "mytests.py", line 7, in test_hello
    self.assertEqual(hello('John'), 'Happy testing! John')
NameError: name 'hello' is not defined

----------------------------------------------------------------------

Ruhshan

def hello():
   pass

Ruhshan

def hello(name):
   pass

Ruhshan

def hello(name):
   return "Happy testing! ",name