Created
May 17, 2019 10:38
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(partial) EasyBuild log for failed build of /scratch/edmondac-admin/eb-huuwmL/files_pr8345/o/OpenBLAS/OpenBLAS-0.3.0-GCC-6.4.0-2.28.eb (PR #8345)
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| == 2019-05-17 11:37:50,495 easyblock.py:279 INFO This is EasyBuild 3.9.1.dev0-r8758fb88a0df8ccd69a9540d9b25ba3da0e36e22 (framework: 3.9.1.dev0-r1e7d5cbaa9ef5b43a378493b3ce556f373ad2b1e, easyblocks: 3.9.1.dev0-r8758fb88a0df8ccd69a9540d9b25ba3da0e36e22) on host bear-pg0305u15a.bear.cluster. | |
| == 2019-05-17 11:37:50,495 easyblock.py:285 INFO This is easyblock EB_OpenBLAS from module easybuild.easyblocks.openblas (/rds/bear-apps/devel/github/edmondac-eb-contrib/src/easybuild-easyblocks/easybuild/easyblocks/o/openblas.py) | |
| == 2019-05-17 11:37:50,496 easyblock.py:840 INFO Build dir set to /dev/shm/build-edmondac-admin/edmondac-admin-contrib/OpenBLAS/0.3.0/GCC-6.4.0-2.28 | |
| == 2019-05-17 11:37:50,496 easyblock.py:900 INFO Software install dir set to /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/OpenBLAS/0.3.0-GCC-6.4.0-2.28 | |
| == 2019-05-17 11:37:50,496 easyblock.py:905 INFO Module install dir set to /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/all | |
| == 2019-05-17 11:37:50,496 easyblock.py:264 INFO Init completed for application name OpenBLAS version 0.3.0 | |
| == 2019-05-17 11:37:50,497 easyblock.py:3018 INFO Obtained application instance of for OpenBLAS (easyblock: None) | |
| == 2019-05-17 11:37:50,497 one.py:146 INFO Skipping reformatting value for parameter 'toolchain' | |
| == 2019-05-17 11:37:50,498 one.py:146 INFO Skipping reformatting value for parameter 'toolchainopts' | |
| == 2019-05-17 11:37:50,500 filetools.py:1207 INFO Creating directory /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583 (parents: True, set_gid: False, sticky: False) | |
| == 2019-05-17 11:37:50,500 easyblock.py:3188 INFO Dumped easyconfig instance to /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/OpenBLAS-0.3.0-GCC-6.4.0-2.28.eb | |
| == 2019-05-17 11:37:50,500 filetools.py:1207 INFO Creating directory /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/easyblocks (parents: True, set_gid: False, sticky: False) | |
| == 2019-05-17 11:37:50,501 filetools.py:1677 INFO /rds/bear-apps/devel/github/edmondac-eb-contrib/src/easybuild-easyblocks/easybuild/easyblocks/o/openblas.py copied to /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/easyblocks/openblas.py | |
| == 2019-05-17 11:37:50,501 easyblock.py:3203 INFO Dumped easyblock openblas.py required for reproduction to /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/easyblocks | |
| == 2019-05-17 11:37:50,502 filetools.py:1677 INFO /rds/bear-apps/devel/github/edmondac-eb-contrib/src/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/easyblocks/configuremake.py | |
| == 2019-05-17 11:37:50,502 easyblock.py:3203 INFO Dumped easyblock configuremake.py required for reproduction to /scratch/edmondac-admin/eb-huuwmL/reprod_20190517113750_104583/easyblocks | |
| == 2019-05-17 11:37:50,502 easyblock.py:1599 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2019-05-17 11:37:50,502 build_log.py:252 INFO building and installing OpenBLAS/0.3.0-GCC-6.4.0-2.28... | |
| == 2019-05-17 11:37:50,503 build_log.py:252 INFO fetching files... | |
| == 2019-05-17 11:37:50,503 easyblock.py:2798 INFO Starting fetch step | |
| == 2019-05-17 11:37:50,503 easyblock.py:2804 INFO Running method fetch_step part of step fetch | |
| == 2019-05-17 11:37:50,503 easyblock.py:1680 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2019-05-17 11:37:50,504 filetools.py:394 INFO Command eb found at /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/venv-dev-github-contrib/bin/eb | |
| == 2019-05-17 11:37:51,110 filetools.py:539 WARNING URL http://www.netlib.org/lapack/timing/v0.3.0.tar.gz was not found (HTTP response code 404), not trying again | |
| == 2019-05-17 11:37:51,111 filetools.py:565 WARNING Download of http://www.netlib.org/lapack/timing/v0.3.0.tar.gz to /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz failed, done trying | |
| == 2019-05-17 11:37:58,040 filetools.py:532 INFO Downloaded file v0.3.0.tar.gz from url https://github.com/xianyi/OpenBLAS/archive/v0.3.0.tar.gz to /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz | |
| == 2019-05-17 11:37:58,040 filetools.py:562 INFO Successful download of file v0.3.0.tar.gz from url https://github.com/xianyi/OpenBLAS/archive/v0.3.0.tar.gz to path /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz | |
| == 2019-05-17 11:37:58,041 easyblock.py:752 INFO Successfully downloaded source file v0.3.0.tar.gz from https://github.com/xianyi/OpenBLAS/archive/v0.3.0.tar.gz | |
| == 2019-05-17 11:37:58,041 easyblock.py:393 INFO Added sources: [{'path': '/rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/build-edmondac-admin/edmondac-admin-contrib/OpenBLAS/0.3.0/GCC-6.4.0-2.28', 'name': 'v0.3.0.tar.gz', 'checksum': 'cf51543709abe364d8ecfb5c09a2b533d2b725ea1a66f203509b21a8e9d8f1a1'}] | |
| == 2019-05-17 11:37:58,041 filetools.py:394 INFO Command eb found at /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/venv-dev-github-contrib/bin/eb | |
| == 2019-05-17 11:37:58,043 easyblock.py:668 INFO Found file large.tgz at /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz | |
| == 2019-05-17 11:37:58,043 filetools.py:394 INFO Command eb found at /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/venv-dev-github-contrib/bin/eb | |
| == 2019-05-17 11:37:58,044 easyblock.py:668 INFO Found file timing.tgz at /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz | |
| == 2019-05-17 11:37:58,045 easyblock.py:459 INFO Added patches: [{'path': '/rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz', 'copy': '.', 'name': 'large.tgz', 'checksum': 'f328d88b7fa97722f271d7d0cfea1c220e0f8e5ed5ff01d8ef1eb51d6f4243a1'}, {'path': '/rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz', 'copy': '.', 'name': 'timing.tgz', 'checksum': '999c65f8ea8bd4eac7f1c7f3463d4946917afd20a997807300fe35d70122f3af'}] | |
| == 2019-05-17 11:37:58,081 easyblock.py:1731 INFO md5 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz: 42cde2c1059a8a12227f1e6551c8dbd2 | |
| == 2019-05-17 11:37:58,158 easyblock.py:1731 INFO sha256 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz: cf51543709abe364d8ecfb5c09a2b533d2b725ea1a66f203509b21a8e9d8f1a1 | |
| == 2019-05-17 11:37:58,158 easyblock.py:1731 INFO md5 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz: 5d138a84f302fd6804e4fab4b338cb18 | |
| == 2019-05-17 11:37:58,158 easyblock.py:1731 INFO sha256 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz: f328d88b7fa97722f271d7d0cfea1c220e0f8e5ed5ff01d8ef1eb51d6f4243a1 | |
| == 2019-05-17 11:37:58,162 easyblock.py:1731 INFO md5 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz: 2025bee0fecccc792938978d857472f4 | |
| == 2019-05-17 11:37:58,169 easyblock.py:1731 INFO sha256 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz: 999c65f8ea8bd4eac7f1c7f3463d4946917afd20a997807300fe35d70122f3af | |
| == 2019-05-17 11:37:58,170 easyblock.py:1766 INFO Checking dirs that need to be created: ['/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/OpenBLAS/0.3.0-GCC-6.4.0-2.28', '/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/all/OpenBLAS', '/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/numlib/OpenBLAS'] | |
| == 2019-05-17 11:37:58,170 filetools.py:1207 INFO Creating directory /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/OpenBLAS/0.3.0-GCC-6.4.0-2.28 (parents: True, set_gid: False, sticky: False) | |
| == 2019-05-17 11:37:58,172 configuremake.py:123 INFO Found recent config.guess at /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v3.9.1.dev0/ConfigureMake/config.guess, using it if required | |
| == 2019-05-17 11:37:58,173 build_log.py:252 INFO creating build dir, resetting environment... | |
| == 2019-05-17 11:37:58,173 easyblock.py:2798 INFO Starting ready step | |
| == 2019-05-17 11:37:58,173 easyblock.py:2804 INFO Running method check_readiness_step part of step ready | |
| == 2019-05-17 11:37:58,175 run.py:192 INFO running cmd: ulimit -u | |
| == 2019-05-17 11:37:58,211 easyblock.py:1618 INFO Setting parallelism: 36 | |
| == 2019-05-17 11:37:58,221 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2019-05-17 11:37:58,221 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2019-05-17 11:37:58,222 easyblock.py:1632 WARNING Loaded modules detected: ['bb-variables/12', 'slurm-moab-wrappers/2', 'slurm-helpers/3', 'openmpi-env/5', 'bear-licences/4', 'bb-singularity-conf/1', 'bluebear/20'] | |
| == 2019-05-17 11:37:58,222 easyblock.py:2804 INFO Running method make_builddir part of step ready | |
| == 2019-05-17 11:37:58,222 filetools.py:1207 INFO Creating directory /dev/shm/build-edmondac-admin/edmondac-admin-contrib/OpenBLAS/0.3.0/GCC-6.4.0-2.28 (parents: True, set_gid: False, sticky: False) | |
| == 2019-05-17 11:37:58,223 easyblock.py:2804 INFO Running method reset_env part of step ready | |
| == 2019-05-17 11:37:58,224 easyblock.py:2804 INFO Running method handle_iterate_opts part of step ready | |
| == 2019-05-17 11:37:58,224 build_log.py:252 INFO unpacking... | |
| == 2019-05-17 11:37:58,224 easyblock.py:2798 INFO Starting source step | |
| == 2019-05-17 11:37:58,225 easyblock.py:2804 INFO Running method checksum_step part of step source | |
| == 2019-05-17 11:37:58,302 easyblock.py:1782 INFO Checksum verification for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz using cf51543709abe364d8ecfb5c09a2b533d2b725ea1a66f203509b21a8e9d8f1a1 passed. | |
| == 2019-05-17 11:37:58,302 easyblock.py:1782 INFO Checksum verification for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz using f328d88b7fa97722f271d7d0cfea1c220e0f8e5ed5ff01d8ef1eb51d6f4243a1 passed. | |
| == 2019-05-17 11:37:58,309 easyblock.py:1782 INFO Checksum verification for /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz using 999c65f8ea8bd4eac7f1c7f3463d4946917afd20a997807300fe35d70122f3af passed. | |
| == 2019-05-17 11:37:58,309 easyblock.py:2804 INFO Running method extract_step part of step source | |
| == 2019-05-17 11:37:58,309 easyblock.py:1850 INFO Unpacking source v0.3.0.tar.gz | |
| == 2019-05-17 11:37:58,311 run.py:192 INFO running cmd: tar xzf /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/v0.3.0.tar.gz | |
| == 2019-05-17 11:37:59,004 build_log.py:252 INFO patching... | |
| == 2019-05-17 11:37:59,004 easyblock.py:2798 INFO Starting patch step | |
| == 2019-05-17 11:37:59,005 easyblock.py:2804 INFO Running method patch_step part of step patch | |
| == 2019-05-17 11:37:59,005 easyblock.py:1862 INFO Applying patch large.tgz | |
| == 2019-05-17 11:37:59,006 filetools.py:1677 INFO /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/large.tgz copied to /dev/shm/build-edmondac-admin/edmondac-admin-contrib/OpenBLAS/0.3.0/GCC-6.4.0-2.28/OpenBLAS-0.3.0 | |
| == 2019-05-17 11:37:59,006 easyblock.py:1862 INFO Applying patch timing.tgz | |
| == 2019-05-17 11:37:59,008 filetools.py:1677 INFO /rds/bear-sysadmin/configmgmt/easybuild/sources/o/OpenBLAS/timing.tgz copied to /dev/shm/build-edmondac-admin/edmondac-admin-contrib/OpenBLAS/0.3.0/GCC-6.4.0-2.28/OpenBLAS-0.3.0 | |
| == 2019-05-17 11:37:59,008 build_log.py:252 INFO preparing... | |
| == 2019-05-17 11:37:59,008 easyblock.py:2798 INFO Starting prepare step | |
| == 2019-05-17 11:37:59,008 easyblock.py:2804 INFO Running method prepare_step part of step prepare | |
| == 2019-05-17 11:37:59,097 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2019-05-17 11:37:59,098 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2019-05-17 11:37:59,127 build_log.py:163 ERROR EasyBuild crashed with an error (at ?:124 in __init__): No module found for toolchain: GCC/6.4.0-2.28 (at easybuild/tools/toolchain/toolchain.py:599 in _load_modules) | |
| == 2019-05-17 11:37:59,127 easyblock.py:3048 WARNING build failed (first 300 chars): No module found for toolchain: GCC/6.4.0-2.28 | |
| == 2019-05-17 11:37:59,127 easyblock.py:294 INFO Closing log for application name OpenBLAS version 0.3.0 |
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