alanorth / dspaces.csv

Last active July 11, 2024 13:08

List of DSpace 7 instances to serve as inspiration for those of us who have not yet managed to take the plunge

	version	url
	7.0	https://repository.museumsiam.org
	7.0	https://minerva-access.unimelb.edu.au
	7.0	https://unsworks.unsw.edu.au
	7.4	https://corpus.ulaval.ca
	7.5-SNAPSHOT	https://dspace.alquds.edu
	7.5	https://openaccess.marmara.edu.tr
	7.2.1	https://oasis.col.org
	7.2.1	https://open.fsc.org
	7.4	https://openaccess.bezmialem.edu.tr

alanorth / error.log

Created May 17, 2023 10:30

Error during `test_database` step of `ant update` with DSpace 7.6-SNAPSHOT.

	$ ant update clean_backups -Doverwrite=true
	Buildfile: /home/aorth/src/git/DSpace-7/dspace/target/dspace-installer/build.xml

	prepare_configs:
	[mkdir] Created dir: /home/aorth/src/git/DSpace-7/dspace/target/dspace-installer/config-temp
	[copy] Copying 232 files to /home/aorth/src/git/DSpace-7/dspace/target/dspace-installer/config-temp
	[copy] Copying 1 file to /home/aorth/src/git/DSpace-7/dspace/target/dspace-installer/config-temp
	[copy] Copying 14 files to /home/aorth/src/git/DSpace-7/dspace/target/dspace-installer/config-temp

	copy_configs_keep:

alanorth / PKGBUILD

Created May 11, 2023 12:13

Arch Linux PKGBUILD for system76-scheduler 2.0.1

	# Maintainer: Donald Carr <d _at_ chaos-reins.com>

	_pkgname=system76-scheduler
	pkgname=${_pkgname}
	pkgver=2.0.1
	pkgrel=1
	pkgdesc='system76 userspace scheduler'
	arch=(x86_64)
	url='https://github.com/pop-os/system76-scheduler'
	license=('MPL-2')

alanorth / PKGBUILD

Created March 30, 2023 18:46

Updated PKGBUILD for imagemagick-git

	# Maintainer: Chris Severance aur.severach aATt spamgourmet dott com
	# Contributor: Limao Luo <[email protected]>
	# Contributor: Stefan Husmann <[email protected]>
	# From core package
	# Maintainer: Antonio Rojas <[email protected]>
	# Contributor: Eric Bélanger <[email protected]>

	_pkgname='imagemagick'
	pkgbase="${_pkgname}-git"
	_srcdir='ImageMagick'

alanorth / geojson-test.py

Created March 6, 2023 12:37

Checking if GPS points are in a polygon with Shapely

	#!/usr/bin/env python
	#
	# Given the three points below, this code prints:
	#
	# $ ~/src/geojson-test.py
	# True
	# True
	# False
	#
	# Requires shapely to be installed in the virtual environment.

alanorth / PKGBUILD

Created February 26, 2023 18:47

PKGBUILD for waybar-git, updated to match official Arch Linux waybar package

	# Maintainer: Alexis Rouillard <[email protected]>

	pkgname=waybar-git
	pkgver=r2429.09142fa3
	pkgrel=1
	pkgdesc='Highly customizable Wayland bar for Sway and Wlroots based compositors (GIT)'
	arch=('x86_64')
	url="https://github.com/Alexays/Waybar/"
	license=('MIT')
	depends=(

alanorth / beast-array.sbatch

Created January 31, 2023 08:34

Example of SLURM array job for Everlyn

	#!/usr/bin/bash -l
	#SBATCH -p batch
	#SBATCH -n 8
	#SBATCH -J prank

	# Start a job array with eight CPUs total where we iterate over 1,000+ FASTA
	# files and start a prank command for each one. SLURM ensures that there are
	# no more than eight running at the same time within the same allocation.
	#
	# See: https://support.ceci-hpc.be/doc/_contents/QuickStart/SubmittingJobs/SlurmTutorial.html#packed-jobs-example

alanorth / find-by-metadata-field.md

Last active December 7, 2022 15:38

Example of using the DSpace 6.x REST API's find-by-metadata-field endpoint.

Step 1

POST a JSON object with your search terms:

$ curl -s -f -H "Content-Type: application/json" -X POST \
    "https://dspacetest.cgiar.org/rest/items/find-by-metadata-field?expand=bitstreams" \
    -d '{"key":"dcterms.subject", "value":"climate variability","language": "en_US"}' | \
    python -m json.tool
...

alanorth / migrate-ldif.awk

Created November 11, 2022 07:20

Migrate an LDIF from RFC 2307 to RFC 2307bis, ie the schema used in 389-ds 1.3.x to 1.4+.

	BEGIN {}

	/dn: uid=.*,ou=People,dc=ilri,dc=cgiar,dc=org/ {
	print "# User migrated to RFC 2307bis";

	# Keep getting the next line until we have a blank one (which means this
	# user's LDIF entry is finished).
	while ($0 !~ /^$/) {
	# Lines to update or remove. I comment them out by printing a hash and
	# "&", which is a special awk syntax to print the pattern that matched.

alanorth / iwmi-rss.xml

Created October 3, 2022 11:26

Source code for https://feeds.feedburner.com/iwmi-cgspace

	<?xml version="1.0" encoding="UTF-8"?>
	<rss xmlns:opensearch="http://a9.com/-/spec/opensearch/1.1/" xmlns:dc="http://purl.org/dc/elements/1.1/" version="2.0">
	<channel>
	<title>International Water Management Institute (IWMI)</title>
	<link>https://hdl.handle.net/10568/16814</link>
	<description>IWMI</description>
	<pubDate>Sun, 02 Oct 2022 14:12:11 GMT</pubDate>
	<dc:date>2022-10-02T14:12:11Z</dc:date>
	<opensearch:itemsPerPage>40</opensearch:itemsPerPage>
	<opensearch:totalResults>7644</opensearch:totalResults>

Alan Orth alanorth

Step 1