activate conda in shell with this command
eval "$(/home/localstack/anaconda3/bin/conda shell.bash hook)"
configure bioconda
conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge
""" | |
Quick and dirty script to compare the sitemap of an old nikola page with its hugo successor | |
""" | |
from lxml import etree | |
import requests | |
def get_urls(filename: str) -> set[str]: | |
tree_sitemap = etree.parse(filename) | |
ns = {"sitemap": "http://www.sitemaps.org/schemas/sitemap/0.9"} |
#!/bin/bash | |
set -euo pipefail | |
# Prerequisites: | |
# - await.sh: https://gist.github.com/alexrashed/9dc04e78cff737b7cbb42861b6555221#file-await-sh | |
# - ntfy: https://github.com/binwiederhier/ntfy | |
# - Github CLI: https://cli.github.com/ | |
if [[ $# -eq 0 ]]; then | |
echo "No URL given, trying to get URL for PR in current branch..." |
# syntax=docker/dockerfile:1.3 | |
FROM busybox | |
RUN --mount=type=secret,id=GITHUB_TOKEN echo "This is the token: $(cat /run/secrets/GITHUB_TOKEN)" |
activate conda in shell with this command
eval "$(/home/localstack/anaconda3/bin/conda shell.bash hook)"
configure bioconda
conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge
#!/bin/bash | |
# Simple bash script to wait for a worfklwo to finish (f.e. to trigger a notification) | |
# Based on https://github.com/rockymadden/circleci-cli | |
token=$CIRCLECI_TOKEN | |
resolution=15 | |
workflow=$1 | |
function await() { | |
function go() { |
from collections import defaultdict | |
from typing import List | |
import logging | |
from botocore.model import OperationModel | |
from localstack.aws.spec import list_services | |
def resolvable(operation_models: List[OperationModel]): |
from typing import cast, Callable | |
from botocore.model import StructureShape, ListShape, Shape, MapShape, ServiceModel | |
from localstack.aws.spec import list_services | |
def traverse_members(service: ServiceModel, shape: Shape, fun: Callable, traversed_shapes=None, hierarchy=0): | |
if traversed_shapes is None: | |
traversed_shapes = [] |
# Alpine | |
apk add coreutils | |
apk info | xargs -n1 -I{} apk info -s {} | xargs -n4 | awk '{print $4,$1}' | numfmt --field=1 --to=iec-i --suffix=B | sort -rh | head -n20 | |
# Debian | |
dpkg-query -Wf '${Installed-Size}\t${Package}\n' | awk '{print $1,$2}' | numfmt --field=1 --from-unit=1024 --to=iec-i --suffix=B | sort -rh | head -n20 |
#!/bin/bash | |
# This is just a writeup to build an ext4 FS on top of ZFS to overcome issues with the Docker ZFS storage driver. | |
# DO NOT EXECUTE THIS SCRIPT IF YOU DO NOT KNOW WHAT YOU'RE DOING! | |
sudo zfs create -V 100G rpool/docker-overlay | |
sudo mkfs.ext4 /dev/zvol/rpool/docker-overlay | |
sudo mount /dev/zvol/rpool/docker-overlay /var/lib/docker-overlay | |
docker system prune -af | |
sudo su | |
cat > /etc/docker/daemon.json << EOF | |
{ |