| #!/bin/bash | |
| ## Wrapper to interact with NCBI SRA using aspera ascp command line interface | |
| ## v 2.5 | 04/2017 | |
| ## @sbamin | |
| # More info: http://download.asperasoft.com/download/docs/ascp/2.7/html/ | |
| # usage | |
| show_help() { |
Clone this gist into the working directory
git clone [email protected]:96670d2eb66a8ad9854b6f52a2b5339c.git vagrant-ansible-neo
cd vagrant-ansible-neo
Install the neo4j role into the working directory
ansible-galaxy install julienroubieu.neo4j -p .
Bring up the vagrant box
| Byobu is a suite of enhancements to tmux, as a command line | |
| tool providing live system status, dynamic window management, | |
| and some convenient keybindings: | |
| F1 * Used by X11 * | |
| Shift-F1 Display this help | |
| F2 Create a new window | |
| Shift-F2 Create a horizontal split | |
| Ctrl-F2 Create a vertical split | |
| Ctrl-Shift-F2 Create a new session |
This gist lets you keep IPython notebooks in git repositories. It tells git to ignore prompt numbers and program outputs when checking that a file has changed.
To use the script, follow the instructions given in the script's docstring.
For further details, read this blogpost.
The procedure outlined here is inspired by this answer on Stack Overflow.
| def explode_hstore(df, column): | |
| """Explode a column of a dataframe containing PostgreSQL hstore k-v pairs in the format of: | |
| "foo"=>"bar", "baz"=>"quux", ... | |
| Every key becomes a column. If a given row's pairs doesn't have a key, then the resulting column's value | |
| will contain NaN. | |
| """ | |
| # split the tags column out as a new series, and break up each k=>v pair | |
| s = df[column].str.split(', ').apply(pd.Series, 1).stack() |
| # Last updated May, 2024 for Apple silicon Macs | |
| # Install Homebrew if you don't already have it: https://brew.sh | |
| # install nano from homebrew | |
| brew install nano nanorc | |
| # update your nanorc file | |
| echo 'include "'"$(brew --cellar nano)"'/*/share/nano/*.nanorc"' >> ~/.nanorc | |
| # close and re-open your terminal and you'll have syntax highlighting |
