Ariel Rokem arokem

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arokem / lhooq.ipynb

Last active December 9, 2015 16:48

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arokem / simulation_dti

Created December 28, 2012 18:55

Simulation of a single tensor from the Stejskal/Tanner equation and an attempt to fit it with dipy

arokem / coherence_filtering

Last active December 10, 2015 16:48

arokem / FP DWI RMSE

Last active December 12, 2015 02:38

arokem / HT DWI RMSE

Created February 2, 2013 23:55

arokem / mosaic

Created February 11, 2013 03:02

Vizualize a 3D volume as a mosaic of slice-by-slice 2D images

	import numpy as np
	import matplotlib
	import matplotlib.pyplot as plt

	def mosaic(vol, fig=None, title=None, size=[10,10], vmin=None, vmax=None,
	return_mosaic=False, cbar=True, return_cbar=False, **kwargs):
	"""
	Display a 3-d volume of data as a 2-d mosaic

	Parameters

arokem / get_the_gaba

Created February 28, 2013 19:32

arokem / qt_mpl_pyside_datasource.py

Created April 10, 2013 03:14 — forked from jfburkhart/qt_mpl_pyside_datasource.py

	"""
	Series of data are loaded from a .csv file, and their names are
	displayed in a checkable list view. The user can select the series
	it wants from the list and plot them on a matplotlib canvas.

	Use the sample .csv file that comes with the script for an example
	of data series.

	Eli Bendersky ([email protected])
	License: this code is in the public domain

arokem / find_corpus_callosum

Created April 11, 2013 21:23

	{
	"metadata": {
	"name": "find_corpus_callosum-Copy0"
	},
	"nbformat": 3,
	"nbformat_minor": 0,
	"worksheets": [
	{
	"cells": [
	{

arokem / figure 1

Created April 11, 2013 21:27