First you'll need to install a few packages if you don't already have them
install.packages(c("plyr", "ggplot2", "rfisheries"))
# Next load up the package
library(rfisheries)
Jaime Ashander ashander
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| data(PlantGrowth) | |
| pg<-subset(PlantGrowth,group!='ctrl') | |
| pg$group=factor(pg$group) | |
| pg1= pg[pg$group=='trt1',] | |
| pg2= pg[pg$group=='trt2',] | |
| hist(pg$weight) | |
| lines(density(pg1$weight), col='blue') | |
| lines(density(pg2$weight), col='red') |
ashander
/ tufteknitr.Rmd
Created
October 22, 2012 19:57
Example of producing Tufte latex from knitr Rmd. Use knit('tufteknitr.Rmd') in R, then mmd2pdf tufteknitr.md at command prompt.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| latex input: mmd-tufte-handout-header | |
| Title: Tufte latex from Rmd example | |
| Base Header Level: 2 | |
| latex mode: memoir | |
| author: Jaime Ashander | |
| copyright: 2011 Jaime Ashander | |
| This work is licensed under a Creative Commons License. | |
| http://creativecommons.org/licenses/by-nc-sa/3.0/ | |
| latex input: mmd-natbib-plain | |
| latex input: mmd-tufte-handout-begin-doc |
ashander
/ 01.configure
Last active
August 29, 2015 13:56
— forked from anonymous/01.configure
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| checking build system type... i386-apple-darwin10.8.0 | |
| checking host system type... i386-apple-darwin10.8.0 | |
| checking for gcc... gcc-4.2 | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc-4.2 accepts -g... yes |
ashander
/ fisheries_example_DRS.md
Created
February 10, 2014 02:17
— forked from karthik/fisheries_example_DRS.md
ashander
/ ESAhtmltableexample.R
Created
August 26, 2014 20:26
Grabbing data from html tables in ESA-archived data
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # get data from html tables in ESA archive | |
| # http://www.esapubs.org/archive/mono/M081/023/suppl-1.htm | |
| library(XML) | |
| root <- 'http://www.esapubs.org/archive/mono/M081/023' | |
| tips <- c('limn.html', 'latitudes.html', 'fish.html', 'acronyms.html') | |
| dat <- lapply(tips, function(t) | |
| readHTMLTable(paste(root, t, sep='/'))) | |
ashander
/ extern-test.R
Last active
August 29, 2015 14:07
minimal example for knitr externalization issue
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| ## @knitr my-external-chunk | |
| set.seed(111) | |
| rnorm(100) |
ashander
/ get_spdf_gadm.R
Last active
August 29, 2015 14:16
Looking at mapping from gadm using gadm2 urls
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| ## urls were updated for gdam2 -- should go to gadm.org to update for each run of this | |
| ## http://gadm.org/country | |
| ## choose a country and R spdf from dropdown | |
| ## eg for | |
| ##for AFG sends POST req http://gadm.org/download?OK=OK&_submit_check=1&cnt=AFG_Afghanistan&thm=R%23R%20data | |
| ##returns page with list of download links (likely based on your location and data availability) | |
| ## part of the page looks like | |
| ## | |
| ## download |
ashander
/ feather_vs_hdf5.ipynb
Last active
April 10, 2016 22:03
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # placeholder |
ashander
/ recover-iterm2-tmux.md
Last active
May 5, 2016 19:57
recovering iTerm2 when a process inside a tmux-integrated session lock up and session restoration is enabled
- kill iterm2 from Activity Monitor
- open a terminal
- login to tmux and back up using tmux resurrect or similar
pkill iTerm
ps |grep tmux
kill -9 # for each [pid] correesponding to a `tmux -CC` process,
# you could use pkill instead if you got the pattern right?OlderNewer