Roll your own iPython Notebook server with Amazon Web Services (EC2) using their Free Tier.
Benjamin Chan benjamin-chan
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| body, td { | |
| font-family: 'Lato', sans-serif; | |
| background-color: white; | |
| font-size: medium; | |
| margin: 8px; | |
| } | |
| tt, code, pre { | |
| font-family: Consolas, Monaco, monospace; | |
| } |
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| ################################################################################ | |
| # | |
| # R.nanorc -- nano syntax-highlighting file for R | |
| # | |
| # Origin: This file is part of the pkgutils package for R. | |
| # | |
| # Usage: This file should be placed in a directory such as /usr/share/nano/ (on | |
| # Ubuntu 12.04). That nano uses syntax highlighting at all might need to be | |
| # enabled separately. |
benjamin-chan
/ roll_ipython_in_aws.md
Created
May 28, 2016 09:23
— forked from iamatypeofwalrus/roll_ipython_in_aws.md
Create an iPython HTML Notebook on Amazon's AWS Free Tier from scratch.
benjamin-chan
/ create-R-EC2.sh
Last active
May 28, 2016 13:09
— forked from randyzwitch/create-R-EC2.sh
Using R on Amazon EC2 - Part 1
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| #Create a user, home directory and set password | |
| sudo useradd rstudio | |
| sudo mkdir /home/rstudio | |
| sudo passwd rstudio | |
| sudo chmod -R 0777 /home/rstudio | |
| #Update all files from the default state | |
| sudo apt-get update | |
| sudo apt-get upgrade |
benjamin-chan
/ r-ec2-part2.sh
Created
May 28, 2016 13:09
— forked from randyzwitch/r-ec2-part2.sh
Using R on Amazon EC2 - Part 2
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| #Install in order to use RCurl & XML | |
| sudo aptitude install libcurl4-openssl-dev | |
| sudo apt-get install libxml2-dev |
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| checkPackage <- function (pkg) { | |
| # Check if pkg is installed; if not then install it; if an update exists then update | |
| # Usage: | |
| # > checkPackage("data.table") | |
| if (is.character(pkg) == TRUE) { | |
| repos <- "https://cloud.r-project.org" | |
| if(pkg %in% rownames(installed.packages()) == FALSE) { | |
| install.packages(pkg, repos=repos, dependencies=TRUE) | |
| rowid <- which(installed.packages()[, "Package"] == pkg) | |
| pkgInfo <- installed.packages()[rowid, ] |
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| install.packages("devtools") | |
| library("devtools") | |
| devtools::install_github("klutometis/roxygen") | |
| library(roxygen2) | |
| setwd("C:/Users/chanb/Documents/GitHub Repositories") | |
| create("prepR") | |
| setwd("./prepR") | |
| document() |
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| packages <- c("devtools", | |
| "data.table", | |
| "lubridate", | |
| "ggplot2", | |
| "haven", | |
| "readxl", | |
| "tidyr", | |
| "lme4", | |
| "metafor", | |
| "DiagrammeR", |
benjamin-chan
/ getSynPUF.R
Last active
July 29, 2016 21:25
Download CMS 2008-2010 Data Entrepreneurs' Synthetic Public Use File (DE-SynPUF)
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| getSynPUF <- function (zipFile) { | |
| # [CMS 2008-2010 Data Entrepreneurs' Synthetic Public Use File (DE-SynPUF)](https://www.cms.gov/Research-Statistics-Data-and-Systems/Downloadable-Public-Use-Files/SynPUFs/DE_Syn_PUF.html) | |
| # | |
| # Examples: | |
| # | |
| # > getSynPUF("DE1_0_2008_to_2010_Carrier_Claims_Sample_1A.zip") | |
| # > getSynPUF("DE1_0_2008_to_2010_Carrier_Claims_Sample_1B.zip") | |
| # > getSynPUF("DE1_0_2010_Beneficiary_Summary_File_Sample_1.zip") | |
| # | |
| require(readr) |
benjamin-chan
/ installMarkDoc.do
Last active
August 11, 2016 18:02
Set up and install MarkDoc for Stata
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| /* See http://www.haghish.com/statistics/stata-blog/reproducible-research/markdoc.php */ | |
| ssc install markdoc /* installing MarkDoc package */ | |
| ssc install weaver /* installing Weaver package */ | |
| ssc install statax /* installing Statax package */ | |
| markdoc smclfile, replace install export(docx) /* exporting Microsoft Office Docx word */ | |
| markdoc adofile, replace install export(sthlp)/* exporting sthlp Stata help file */ |