Ben Jeffery benjeffery

The default repos of all the tskit-dev repos is changing from master to "main" at 1200UTC on 20200928. (Monday)

The following repos are affected:

	regions <--- THIS NEEDS POPULATING!
	id
	lat
	lng
	name
	description
	num_samples

	countries
	id

	import itertools
	import sys
	from time import perf_counter
	from matplotlib import pyplot
	from scipy import stats
	import numpy as np
	import tqdm

	sys.path.append('/home/benj/projects/tskit/python')
	import tskit

	/home/benj/projects/tskit/c/build/../tskit/convert.c:26:1: warning: #includes are not sorted properly [llvm-include-order]
	#include <stdio.h>
	^ ~~~~~~~~~
	<assert.h>
	/home/benj/projects/tskit/c/build/../tskit/convert.c:26:1: warning: #includes are not sorted properly [llvm-include-order]
	#include <stdio.h>
	^ ~~~~~~~~~
	<assert.h>
	/home/benj/projects/tskit/c/build/../tskit/core.c:26:1: warning: #includes are not sorted properly [llvm-include-order]
	#include <stdio.h>

	id site node time derived_state parent metadata
	0 0 48 2.0800060772564484 1 -1
	1 0 48 2.0572024992858435 0 0
	2 0 31 1.5647409985500718 1 1
	3 0 31 1.0950830757849048 0 2
	4 0 23 0.46366628550498323 1 3
	5 0 23 0.3019074179902289 0 4
	6 0 7 0.0934323669836497 1 5
	7 0 7 0.04671618349182485 0 6
	8 0 5 0.0934323669836497 1 5

	import datetime
	import time
	import requests
	import playsound #You might need to install pygobject if you get an error about missing "gi" module for this.

	playsound.playsound("ding.mp3") #You'll need a file here that is noisy
	while True:
	try:
	r = requests.post(
	"https://ads-prd-gov-1-sp.test-for-coronavirus.service.gov.uk/testcentres/availabilityquery",

	static PyObject *
	IndividualTable_extend(IndividualTable self, PyObject args, PyObject *kwds)
	{
	PyObject *ret = NULL;
	IndividualTable *other = NULL;
	PyObject *obj_row_indexes = Py_None;
	PyArrayObject *row_indexes = NULL;
	tsk_id_t *row_indexes_data = NULL;
	tsk_size_t num_rows = 0;
	int err;