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Ben Jeffery benjeffery

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benjeffery / tskit 0.3.6.ipynb
Created May 14, 2021 22:56
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@benjeffery
benjeffery / tskit 0.3.6.html
Created May 14, 2021 22:58
<!DOCTYPE html>
<html>
<head><meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>tskit 0.3.6</title><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.1.10/require.min.js"></script>
@benjeffery
benjeffery / tskit 0.3.6.ipynb
Created May 14, 2021 22:58
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@benjeffery
benjeffery / tskit 0.3.6.ipynb
Last active May 14, 2021 23:08
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@benjeffery
benjeffery / newick_play.py
Created March 29, 2022 17:00
import time
import numpy as np
import numba
import tskit
@numba.njit(cache=True)
def decode(s):
stack = np.zeros(10000, dtype=np.int32)
stack_p = np.int32(0)
@benjeffery
benjeffery / pure_python.py
Created March 29, 2022 17:31
import time
import numpy as np
import numba
import tskit
#@numba.njit(cache=True)
def decode(s):
stack = [0]*10000
stack_p = 0