I hereby claim:
- I am blahah on github.
- I am blahah (https://keybase.io/blahah) on keybase.
- I have a public key whose fingerprint is CAB4 0A1C 6299 A1C7 1A80 4FF6 7571 0934 02B0 C4F8
To claim this, I am signing this object:
sed '1d;$d' | sed 's/<\/article>/<\/article>♛/g' | tr -d '\n' | tr '♛' '\n' | less -S | |
# e.g. download every EuropePMC archive and convert them to a stream of all articles | |
curl --silent http://europepmc.org/ftp/oa/ | \ | |
grep -o 'PMC[0-9]*_PMC[0-9]*\.xml\.gz' | \ | |
sort | uniq | \ | |
sed 's/^/http:\/\/europepmc.org\/ftp\/oa\//' | \ | |
xargs -n 1 curl --silent | gunzip | grep -vP '<\/?articles>' | \ | |
sed 's/<\/article>/<\/article>♛/g' | tr -d '\n' | tr '♛' '\n' | less -S |
license: gpl-3.0 |
{ | |
"options": { | |
"died": true, | |
"multigraph": true, | |
"compound": true | |
}, | |
"nodes": [ | |
{ | |
"v": "questions", | |
"value": { |
var CollapsibleTree = function(elt) { | |
var m = [20, 120, 20, 120], | |
w = 1280 - m[1] - m[3], | |
h = 580 - m[0] - m[2], | |
i = 0, | |
root, | |
root2; | |
var tree = d3.layout.tree() |
prefix | publisher | journals | dois | |
---|---|---|---|---|
10.12679 | 0 | 0 | ||
10.7579 | 123Doc Education | 0 | 0 | |
10.3731 | 21st Century COE Program (Toplogical Science and Technology) | 1 | 40 | |
10.5775 | A. I. Rosu Cultural Scientific Foundation Fundatia cultural-stiintifica A. I. Rosu | 1 | 80 | |
10.4037 | AACN Publishing | 2 | 766 | |
10.1306 | AAPG/Datapages | 4 | 21817 | |
10.3183 | AB Svensk Papperstidning | 1 | 1550 | |
10.5769 | ABEAT - Associacao Brasileira de Especialistas em Alta Tecnologia | 1 | 57 | |
10.7597 | ACOPIOS - Revista Iberica de Mineralogia | 1 | 9 |
# with example PDF URL | |
PDF_URL"=http://www.sciencedirect.com/science/article/pii/S0191886909000877/pdfft\?md5\=25fb6461c7b1ebe114acb2cd5ab91ddd\&pid\=1-s2.0-S0191886909000877-main.pdf" | |
wget \ | |
--header "User-Agent: Mozilla/5.0 (Macintosh; Intel Mac OS X 10_10_1) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/47.0.2526.111 Safari/537.36" \ | |
--verbose \ | |
--save-cookies cookies.txt \ | |
--keep-session-cookies \ | |
$PDF_URL | |
# This script demonstrates how to download a mapping from RefSeq mRNA to human gene symbols by using the ensembl biomart service and the bioconductor `biomaRt` package in R. | |
source("https://bioconductor.org/biocLite.R") | |
biocLite("biomaRt") | |
library("biomaRt") | |
# work around bug in resolving host (https://support.bioconductor.org/p/74304/) | |
listMarts(host="www.ensembl.org") |
setwd("~/project_icipe") | |
library(ggplot2) | |
# 1. load the files | |
oases <- read.csv('./oases.csv') | |
soap <- read.csv('./soapdenovotrans.csv') | |
# check the number of rows and columns | |
dim(oases) | |
dim(soap) |
I hereby claim:
To claim this, I am signing this object:
Designed by Stephen Few, a bullet chart “provides a rich display of data in a small space.” A variation on a bar chart, bullet charts compare a given quantitative measure (such as profit or revenue) against qualitative ranges (e.g., poor, satisfactory, good) and related markers (e.g., the same measure a year ago). Layout inspired by Stephen Few. Implementation based on work by Clint Ivy, Jamie Love of N-Squared Software and Jason Davies. The "update" button randomizes the values slightly to demonstrate transitions.