Carl Crott carlcrott
carlcrott
/ final schema
Created
November 17, 2012 02:05
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| # This file is auto-generated from the current state of the database. Instead of editing this file, | |
| # please use the migrations feature of Active Record to incrementally modify your database, and | |
| # then regenerate this schema definition. | |
| # | |
| # Note that this schema.rb definition is the authoritative source for your database schema. If you need | |
| # to create the application database on another system, you should be using db:schema:load, not running | |
| # all the migrations from scratch. The latter is a flawed and unsustainable approach (the more migrations | |
| # you'll amass, the slower it'll run and the greater likelihood for issues). | |
| # | |
| # It's strongly recommended to check this file into your version control system. |
carlcrott
/ gist:4098583
Created
November 17, 2012 18:31
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| # Install RVM | |
| $ bash -s stable < <(curl -s https://raw.github.com/wayneeseguin/rvm/master/binscripts/rvm-installer) | |
| $ source ~/.bashrc | |
| $ which rvm # ensure that rvm is in $PATH | |
| $ rvm get stable | |
| # rvm requirements | |
| $ sudo /usr/bin/apt-get install build-essential openssl libreadline6 libreadline6-dev curl git-core zlib1g zlib1g-dev libssl-dev libyaml-dev libsqlite3-0 libsqlite3-dev sqlite3 libxml2-dev libxslt-dev autoconf libc6-dev ncurses-dev automake libtool bison subversion |
carlcrott
/ gist:4098961
Created
November 17, 2012 19:08
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| $ bundle exec rake db:rollback STEP=2 | |
| WARNING: 'require 'rake/rdoctask'' is deprecated. Please use 'require 'rdoc/task' (in RDoc 2.4.2+)' instead. | |
| at /home/thrive/rails_projects/ebi_projects/betydb/trunk/update/ruby/1.8/gems/rake-0.9.2.2/lib/rake/rdoctask.rb | |
| DEPRECATION WARNING: Rake tasks in vendor/plugins/restful-authentication/tasks are deprecated. Use lib/tasks instead. (called from /home/thrive/rails_projects/ebi_projects/betydb/trunk/update/ruby/1.8/gems/rails-2.3.11/lib/tasks/rails.rb:10) | |
| WARNING: This version of mysql2 (0.3.11) doesn't ship with the ActiveRecord adapter bundled anymore as it's now part of Rails 3.1 | |
| WARNING: Please use the 0.2.x releases if you plan on using it in Rails <= 3.0.x | |
| == RemoveModelTypeFromWorkflows: reverting =================================== | |
| -- add_column(:workflows, :model_type, :string) | |
| -> 0.3110s | |
| == RemoveModelTypeFromWorkflows: reverted (0.3111s) ========================== |
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| ##' .. content for \description{} (no empty lines) .. | |
| ##' | |
| ##' .. content for \details{} .. | |
| ##' @title | |
| ##' @param x | |
| ##' @return | |
| ##' @export | |
| ##' @author David LeBauer | |
| library("devtools") | |
| install("../../ghgvcR") |
carlcrott
/ gist:4107149
Created
November 18, 2012 20:01
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| ##' .. content for \description{} (no empty lines) .. | |
| ##' | |
| ##' .. content for \details{} .. | |
| ##' @title | |
| ##' @param x | |
| ##' @return | |
| ##' @export | |
| ##' @author David LeBauer | |
| source("../R/*R") | |
| get.nums <- function(x){ |
carlcrott
/ gist:4110917
Created
November 19, 2012 14:28
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| ##' .. content for \description{} (no empty lines) .. | |
| ##' | |
| ##' .. content for \details{} .. | |
| ##' @title | |
| ##' @param x | |
| ##' @return | |
| ##' @export | |
| ##' @author David LeBauer | |
| get.nums <- function(x){ | |
| suppressWarnings( |
carlcrott
/ gist:4110929
Created
November 19, 2012 14:30
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| Warning messages: | |
| 1: In install.packages("devtools") : | |
| installation of package ‘RCurl’ had non-zero exit status | |
| 2: In install.packages("devtools") : | |
| installation of package ‘httr’ had non-zero exit status | |
| 3: In install.packages("devtools") : | |
| installation of package ‘devtools’ had non-zero exit status |
carlcrott
/ gist:4112938
Created
November 19, 2012 19:07
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| [{"name":"tropical peat forest","category":"native","T_A":100,"T_E":50,"r":0,"OM_ag":444,"OM_root":108,"OM_wood":0,"OM_litter":0,"OM_peat":1388.889,"OM_SOM":88.96552,"fc_ag_wood_litter":0.5,"fc_root":0,"fc_peat":0,"fc_SOM":0,"Ec_CO2":35.909,"Ec_CH4":0.07,"Ec_N2O":0.0059,"k_ag_wood_litter":0.167,"k_root":0.04,"k_peat":0.02,"k_SOM":0.4,"termite":3,"Ed_CO2_ag_wood_litter":41.66667,"Ed_CO2_root":41.66667,"Ed_CO2_peat":45,"Ed_CO2_litter":48.33333,"Ed_CH4_ag_wood_litter":0.0275,"Ed_CH4_root":0,"Ed_CH4_peat":0,"Ed_CH4_litter":0,"Ed_N2O_ag_wood_litter":0,"Ed_N2O_root":0,"Ed_N2O_peat":0.013645,"Ed_N2O_litter":0,"F_CO2":-443.333,"F_CH4":9.877813,"F_N2O":0.017103,"rd":0,"tR":-9999,"FR_CO2":-9999,"FR_CH4":-9999,"FR_N2O":-9999,"dfc_ag_wood_litter":0.5,"dfc_root":0,"dfc_peat":0,"dk_ag_wood_litter":0.167,"dk_root":0.02,"dk_peat":0.02,"age_transition":-9999,"new_F_CO2":-9999,"new_F_CH4":-9999,"new_F_N2O":-9999,"F_anth":0},{"name":"northern peatland","category":"native","T_A":100,"T_E":50,"r":0,"OM_ag":100,"OM_root":17.6,"OM_ |
carlcrott
/ gist:4115074
Created
November 20, 2012 00:14
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| <?xml version="1.0" encoding="UTF-8"?> | |
| <kml xmlns="http://www.opengis.net/kml/2.2" xmlns:gx="http://www.google.com/kml/ext/2.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" | |
| xsi:schemaLocation="http://www.opengis.net/kml/2.2 http://schemas.opengis.net/kml/2.2.0/ogckml22.xsd http://www.google.com/kml/ext/2.2 http://code.google.com/apis/kml/schema/kml22gx.xsd"> | |
| <Document id="Layers"> | |
| <name>Layers</name> | |
| <Snippet></Snippet> | |
| <Folder id="legend2"> | |
| <name></name> | |
| <Style id="LegendRadioFolder2"><IconStyle><scale>0</scale></IconStyle><ListStyle><listItemType>radioFolder</listItemType></ListStyle></Style> | |
| <ScreenOverlay id="A2"><name>Upper Left</name> |
carlcrott
/ gist:4115097
Created
November 20, 2012 00:18
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| <?xml version="1.0" encoding="UTF-8"?> | |
| <kml xmlns="http://www.opengis.net/kml/2.2" xmlns:gx="http://www.google.com/kml/ext/2.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" | |
| xsi:schemaLocation="http://www.opengis.net/kml/2.2 http://schemas.opengis.net/kml/2.2.0/ogckml22.xsd http://www.google.com/kml/ext/2.2 http://code.google.com/apis/kml/schema/kml22gx.xsd"> | |
| <Document id="Layers"> | |
| <name>Layers</name> | |
| <Snippet></Snippet> | |
| <Folder id="legend2"> | |
| <name></name> | |
| <Style id="LegendRadioFolder2"><IconStyle><scale>0</scale></IconStyle><ListStyle><listItemType>radioFolder</listItemType></ListStyle></Style> | |
| <ScreenOverlay id="A2"><name>Upper Left</name> |