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# This file is auto-generated from the current state of the database. Instead of editing this file,
# please use the migrations feature of Active Record to incrementally modify your database, and
# then regenerate this schema definition.
#
# Note that this schema.rb definition is the authoritative source for your database schema. If you need
# to create the application database on another system, you should be using db:schema:load, not running
# all the migrations from scratch. The latter is a flawed and unsustainable approach (the more migrations
# you'll amass, the slower it'll run and the greater likelihood for issues).
#
# It's strongly recommended to check this file into your version control system.
# Install RVM
$ bash -s stable < <(curl -s https://raw.github.com/wayneeseguin/rvm/master/binscripts/rvm-installer)
$ source ~/.bashrc
$ which rvm # ensure that rvm is in $PATH
$ rvm get stable
# rvm requirements
$ sudo /usr/bin/apt-get install build-essential openssl libreadline6 libreadline6-dev curl git-core zlib1g zlib1g-dev libssl-dev libyaml-dev libsqlite3-0 libsqlite3-dev sqlite3 libxml2-dev libxslt-dev autoconf libc6-dev ncurses-dev automake libtool bison subversion
$ bundle exec rake db:rollback STEP=2
WARNING: 'require 'rake/rdoctask'' is deprecated. Please use 'require 'rdoc/task' (in RDoc 2.4.2+)' instead.
at /home/thrive/rails_projects/ebi_projects/betydb/trunk/update/ruby/1.8/gems/rake-0.9.2.2/lib/rake/rdoctask.rb
DEPRECATION WARNING: Rake tasks in vendor/plugins/restful-authentication/tasks are deprecated. Use lib/tasks instead. (called from /home/thrive/rails_projects/ebi_projects/betydb/trunk/update/ruby/1.8/gems/rails-2.3.11/lib/tasks/rails.rb:10)
WARNING: This version of mysql2 (0.3.11) doesn't ship with the ActiveRecord adapter bundled anymore as it's now part of Rails 3.1
WARNING: Please use the 0.2.x releases if you plan on using it in Rails <= 3.0.x
== RemoveModelTypeFromWorkflows: reverting ===================================
-- add_column(:workflows, :model_type, :string)
-> 0.3110s
== RemoveModelTypeFromWorkflows: reverted (0.3111s) ==========================
##' .. content for \description{} (no empty lines) ..
##'
##' .. content for \details{} ..
##' @title
##' @param x
##' @return
##' @export
##' @author David LeBauer
library("devtools")
install("../../ghgvcR")
##' .. content for \description{} (no empty lines) ..
##'
##' .. content for \details{} ..
##' @title
##' @param x
##' @return
##' @export
##' @author David LeBauer
source("../R/*R")
get.nums <- function(x){
##' .. content for \description{} (no empty lines) ..
##'
##' .. content for \details{} ..
##' @title
##' @param x
##' @return
##' @export
##' @author David LeBauer
get.nums <- function(x){
suppressWarnings(
Warning messages:
1: In install.packages("devtools") :
installation of package ‘RCurl’ had non-zero exit status
2: In install.packages("devtools") :
installation of package ‘httr’ had non-zero exit status
3: In install.packages("devtools") :
installation of package ‘devtools’ had non-zero exit status
[{"name":"tropical peat forest","category":"native","T_A":100,"T_E":50,"r":0,"OM_ag":444,"OM_root":108,"OM_wood":0,"OM_litter":0,"OM_peat":1388.889,"OM_SOM":88.96552,"fc_ag_wood_litter":0.5,"fc_root":0,"fc_peat":0,"fc_SOM":0,"Ec_CO2":35.909,"Ec_CH4":0.07,"Ec_N2O":0.0059,"k_ag_wood_litter":0.167,"k_root":0.04,"k_peat":0.02,"k_SOM":0.4,"termite":3,"Ed_CO2_ag_wood_litter":41.66667,"Ed_CO2_root":41.66667,"Ed_CO2_peat":45,"Ed_CO2_litter":48.33333,"Ed_CH4_ag_wood_litter":0.0275,"Ed_CH4_root":0,"Ed_CH4_peat":0,"Ed_CH4_litter":0,"Ed_N2O_ag_wood_litter":0,"Ed_N2O_root":0,"Ed_N2O_peat":0.013645,"Ed_N2O_litter":0,"F_CO2":-443.333,"F_CH4":9.877813,"F_N2O":0.017103,"rd":0,"tR":-9999,"FR_CO2":-9999,"FR_CH4":-9999,"FR_N2O":-9999,"dfc_ag_wood_litter":0.5,"dfc_root":0,"dfc_peat":0,"dk_ag_wood_litter":0.167,"dk_root":0.02,"dk_peat":0.02,"age_transition":-9999,"new_F_CO2":-9999,"new_F_CH4":-9999,"new_F_N2O":-9999,"F_anth":0},{"name":"northern peatland","category":"native","T_A":100,"T_E":50,"r":0,"OM_ag":100,"OM_root":17.6,"OM_
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