cedrickchee

Originally forked from Philipp Bayer's gist. All credits goes to him.

This gist convert the original text to markdown for better readability.

Problems and Ideas:

1. Gene function prediction - given a predicted protein or gene sequence, what is the function?

The classic approach is to use something like BLAST to compare with known sequences, but this has many drawbacks. For starters, in plants the databases lean very heavily towards Arabidopsis thaliana, not more common plants such as maize or wheat.

cedrickchee

cedrickchee

class AMSgrad(Optimizer):
    """AMSGrad optimizer.

    Default parameters follow those provided in the Adam paper.

    # Arguments
        lr: float >= 0. Learning rate.
        beta_1: float, 0 < beta < 1. Generally close to 1.
        beta_2: float, 0 < beta < 1. Generally close to 1.
        epsilon: float >= 0. Fuzz factor.

cedrickchee

// Use Gists to store code you would like to remember later on
console.log(window); // log the "window" object to the console