Christina Chatzipantsiou cgpu

Do not check from source

options(install.packages.check.source = "no")

# Install packages from cran
install.packages("stringi", repos="http://cran.rstudio.com/", dependencies=TRUE)

title: "Sleek R meta-packages: Pakages that handle package (downloading)" author: "" date: "" output: html_document: toc: true # table of content true toc_depth: 3 # upto three depths of headings (specified by #, ## and ###) toc_float: true number_sections: true # if you want number sections at each table header

title: "How to source .R scripts from github; works for (i) .R scripts stored in projects' repos or (ii) .R scripts saved as gists." author: "cgpu" date: "" output: html_document: toc: true # table of content true toc_depth: 3 # upto three depths of headings (specified by #, ## and ###) toc_float: true number_sections: false # if you want number sections at each table header

	---
	title: 'Imputation of missing data:`impute.MinDet` function from the R package `imputeLCMD`, `missForest` for Random Forest imputation, `impute.knn` function for knn imputation'
	author:
	- name: "cristina "
	affiliation:
	email: ""
	date: ""
	toc: true
	output:
	rmarkdown::github_document:

	# Stack gem here: https://stackoverflow.com/questions/4090169/elegant-way-to-check-for-missing-packages-and-install-them

	list.of.packages <- c("ggplot2", "Rcpp")
	new.packages <- list.of.packages[!(list.of.packages %in% installed.packages()[,"Package"])]
	if(length(new.packages)) install.packages(new.packages)

	# Python-script header etiquette:
	# https://stackoverflow.com/questions/1523427/what-is-the-common-header-format-of-python-files

	#!/usr/bin/env python3
	# -- coding: utf-8 --

	"""
	@author : cristina

	---
	title: "Preventing code from being printed on html output"
	author: "cgpu"
	date: ""
	output: html_document
	---

	```{r global_options, include=FALSE}
	knitr::opts_chunk$set(echo=FALSE, warning=FALSE, message=FALSE)
	```

	#!/usr/bin/env python3
	# -- coding: utf-8 --
	"""
	@author: cristina

	Script for parsing all JAD output .txt files of an input_directory
	to collect ref and equivalent signatures based on user defined threshold for ROC AUC.


	User defined arguments:



	# WHAT : Script for swapping feature IDs in a dataframe.
	# Mapping dataframe required for swapping.
	# A mapping dataframe should contain a minimal of
	# two columns, one named 'current', the other `previous`,
	# One row corresponds to one matching pair.
	# Each row j of mapping df, one feature pair.
	# Values are checked cell by cell (df[k,i]).,
	# in df with values to be swapped.