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March 21, 2020 10:12
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Fenics create a rectangle mesh with markers
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Lx, Ly = 1., .1 | |
ny = 5 | |
nx = int(ny*Lx/Ly) | |
mesh = dolfin.RectangleMesh(dolfin.Point(0, 0), dolfin.Point(Lx, Ly), nx, ny) | |
# Mark boundary subdomains | |
left = dolfin.CompiledSubDomain("near(x[0],0) && on_boundary") | |
right = dolfin.CompiledSubDomain("near(x[0],Lx) && on_boundary",Lx=Lx) | |
bottom = dolfin.CompiledSubDomain("near(x[1],0) && on_boundary") | |
top = dolfin.CompiledSubDomain("near(x[1],Ly) && on_boundary",Ly=Ly) | |
# Mark facets for Neumann BCs | |
boundary_indices = {'left': 1, | |
'right': 2, | |
'top': 3, | |
'bottom': 4} | |
boundary_markers = dolfin.MeshFunction("size_t", mesh, dim=1, value=0) | |
left.mark(boundary_markers, boundary_indices["left"]) | |
right.mark(boundary_markers, boundary_indices["right"]) | |
top.mark(boundary_markers, boundary_indices["top"]) | |
bottom.mark(boundary_markers, boundary_indices["bottom"]) | |
# Redefine element of area to include information about the markers | |
ds = dolfin.ds(domain=mesh, subdomain_data=boundary_markers) | |
dx = dolfin.dx(domain=mesh) | |
dolfin.plot(mesh) | |
with dolfin.XDMFFile("mesh_functions.xdmf") as f: | |
f.write(boundary_markers) | |
# A simple test | |
for i in range(1,5): | |
length = dolfin.assemble(1.*ds(i)) | |
print("side {:d} is of length {:4.2f}".format(i,length)) |
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A simple test
for i in range(4): -> this should be range(1,5):
As boundary markers are 1 to 4.