Félix-Antoine Fortin cmd-ntrf

TensorFlow with a non-system GCC

These instructions were written for our system running CentOS 6.6 using the following SHA of Bazel and TensorFlow:

Bazel : c553e35976582ca861040dac3af12c5ed9f11ede
TensorFlow : 3972c791b9f4d9a61b9ad6399b481df396f359ff

Requirements

GCC 4.6.x or greater

TensorFlow with a non-system GCC

Bazel

version : 0.2.2b hash: b74d9b5

module load compilers/java/1.8
module load compilers/gcc/4.8.5 # clumeq group

Compile Bazel 0.2.3

module purge -f
module load compilers/gcc/4.8.5 compilers/java/1.8 apps/buildtools

cd /software-gpu/src/
mkdir bazel023_tensorflow0.8
cd bazel023_tensorflow0.8

Compile Bazel 0.3.0

module purge -f
module load compilers/gcc/4.8.5 compilers/java/1.8 apps/buildtools

cd /software6/apps/bazel
wget https://github.com/bazelbuild/bazel/archive/0.3.0.tar.gz
tar xvf 0.3.0.tar.gz
mv {bazel-,}0.3.0

module purge -f
module load apps/git compilers/gcc/4.8.5 apps/buildtools

git clone https://github.com/google/protobuf.git

cd protobuf
export CXXFLAGS='-fPIC'
export CFLAGS='-fPIC'
./configure

module purge -f
module load apps/git compilers/gcc/4.8.5 apps/buildtools

git clone https://github.com/google/protobuf.git

cd protobuf
export CXXFLAGS='-fPIC'
export CFLAGS='-fPIC'
./autogen.sh

module purge -f
module load compilers/gcc/4.8.5 compilers/java/1.8 apps/buildtools

cd /tmp
wget https://github.com/bazelbuild/bazel/archive/0.4.3.tar.gz
tar xvf 0.4.3.tar.gz
mv {bazel-,}0.4.3

cd 0.4.3

	from deap import base
	from deap import creator


	def hash_ind_list(self):
	return hash(tuple(self))

	creator.create("FitnessMin", base.Fitness, weights=(-1.0,))
	creator.create("Individual", list, fitness=creator.FitnessMin, __hash__=hash_ind_list)

	#!/bin/bash -f

	#PBS -N apache-spark
	#PBS -l nodes=2:ppn=8
	#PBS -l walltime=00:01:00:00
	#PBS -A <specify account>

	# Define variables
	SPARK_MASTER="spark://$HOSTNAME:7077"
	SPARK_HOME=<specify where is spark installed>

	from ctypes import CDLL
	from ctypes.util import find_library

	LIBPAM = CDLL(find_library("pam"))
	PAM_STRERROR = LIBPAM.pam_strerror