cmungall

fmt,num,diffsize,iteration
owl,1,250481,1
ofn,1,15,1
obo,1,2,1
ttl,1,245804,1
omn,1,22,1
owl,2,249967,1
ofn,2,12,1
obo,2,8,1
ttl,2,245001,1

cmungall

library(ggplot2)

the.data <- read.table( header=TRUE, sep=",", "foo.OUT") 
ggplot(the.data, aes( x = numAxiomsDeleted, y = diffsize, shape = fmt, label = fmt, group = fmt ) ) + 
     scale_shape_discrete(solid=T, legend=T) +
     scale_y_log10() +
     scale_x_log10() +
     geom_point(aes(colour = fmt)) + 
     geom_smooth()

cmungall

#!/usr/bin/perl
my $f = shift @ARGV;

runcmd("save-in-all-formats.sh $f");

our $N=16;
our $ITERATIONS=10;

for (my $iter=1; $iter<= $ITERATIONS; $iter++) {

cmungall

#!/bin/sh
if [ -e catalog-v001.xml ]
then
  X='--use-catalog'
else
  X=""
fi
F=$1;
owltools $X $1 -o $F.owl -o -f ofn $F.ofn -o -f omn $F.omn -o -f ttl $F.ttl -o -f obo --no-check $F.obo
du -sh $F.*

cmungall

# see thea/benchmarks directory
TIME    THEA    CARO    0.0697942
MEM     THEA    CARO    1.885792
TIME    THEA    CL      1.38948
MEM     THEA    CL      8.553492
TIME    THEA    FBbt    19.0624
MEM     THEA    FBbt    38.238024
TIME    THEA    GO      411.418
MEM     THEA    GO      381.50792
TIME    THEA    SO      3.1424

cmungall

============================== Prover9 ===============================
Prover9 (32) version 2008-11A, November 2008.
Process 8186 was started by cjm on skerryvore,
Wed Aug  5 13:44:32 2009
The command was "prover9".
============================== end of head ===========================

============================== INPUT =================================

formulas(sos).