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## GOAL:
## re-create a figure similar to Fig. 2 in Wilson et al. (2018),
## Nature 554: 183-188. Available from:
## https://www.nature.com/articles/nature25479#s1
##
## combines a boxplot (or violin) with the raw data, by splitting each
## category location in two (box on left, raw data on right)
# initial set-up ----------------------------------------------------------
@VladimirPal
VladimirPal / neomuttrc
Last active April 25, 2025 04:53
Minimal neomutt config for gmail imap
set imap_user="[email protected]"
set imap_pass=`/usr/bin/security find-generic-password -w -a '[email protected]' -s 'Gmail'`
set folder=imaps://imap.gmail.com/
set spoolfile=+INBOX
set record="+[Gmail]/Sent Mail"
set postponed="+[Gmail]/Drafts"
# https://www.neomutt.org/guide/reference search sleep_time for additional info
set sleep_time=0 # be faster
@480
480 / gist:3b41f449686a089f34edb45d00672f28
Last active January 23, 2025 16:11
MacOS X + oh my zsh + powerline fonts + visual studio code terminal settings

MacOS X + oh my zsh + powerline fonts + visual studio code (vscode) terminal settings

Thank you everybody, Your comments makes it better

Install oh my zsh

http://ohmyz.sh/

sh -c "$(curl -fsSL https://raw.github.com/ohmyzsh/ohmyzsh/master/tools/install.sh)"
@wcooley
wcooley / Makefile.dash
Last active August 6, 2021 07:38
Building 3rd Party Sphinx Docs for Dash
# docs/Makefile.dash
include Makefile
PROJECT_NAME = $(shell python ../setup.py --name)
.PHONY: dashdoc
dashdoc:
$(SPHINXBUILD) -b html $(ALLSPHINXOPTS) -D 'html_theme=epub' $(BUILDDIR)/dashdoc
doc2dash -A -v -n $(PROJECT_NAME) -d $(BUILDDIR)/ -f -I index.html -j $(BUILDDIR)/dashdoc
@echo
@echo "Build finished. The Docset is in $(BUILDDIR)/$(PROJECT_NAME).docset."
@joshbuchea
joshbuchea / semantic-commit-messages.md
Last active May 13, 2025 21:24
Semantic Commit Messages

Semantic Commit Messages

See how a minor change to your commit message style can make you a better programmer.

Format: <type>(<scope>): <subject>

<scope> is optional

Example

@max-mapper
max-mapper / bibtex.png
Last active November 6, 2024 09:03
How to make a scientific looking PDF from markdown (with bibliography)
bibtex.png
@aahoo
aahoo / A Github Flavored Theme for Ipython or Jupyter Notebook.md
Last active May 20, 2022 09:02
Github Flavored Theme for Ipython/Jupyter Notebook

Github Flavored Theme for Ipython/Jupyter Notebook

Put custom.css in .jupyter/custom/ (if you are running recent version of Jupyter).

Note: Tested only on Chrome. Let me know if something is not working.

img1 img1 img1

@AdamGagorik
AdamGagorik / remote-jupyter-notebook.md
Last active June 5, 2023 06:48
Remote Jupyter Notebook

Description

Use these commands to run a jupyter server on a remote server and access it locally in a browser. You must have SSH access to the browser. Use any port you want.

Do not forget to change username@server to the correct value!

TLDR

where using command
@Brainiarc7
Brainiarc7 / refind-setup.md
Last active July 18, 2024 14:44
Setting up rEFInd on Ubuntu 16.04 LTS for multi-boot purposes with secure boot enabled.

Deploying rEFInd on Ubuntu 16.04 LTS with secure boot enabled

Hello guys,

For these dual-booting Ubuntu 16.04 with an alternate operating system in UEFI boot mode, it may often be necessary to use a third-party boot manager such as rEFInd, as it's significantly superior to grub2's on UEFI-capable systems.

This write-up assumes that:

(a). The user is running a current Ubuntu 16.04LTS operating system installation (preferably on a dual-boot system)

@fladd
fladd / remarkjs.css
Last active August 23, 2018 14:23
CSS of the example slides on http://remarkjs.com
@import url(https://fonts.googleapis.com/css?family=Droid+Serif);
@import url(https://fonts.googleapis.com/css?family=Yanone+Kaffeesatz);
@import url(https://fonts.googleapis.com/css?family=Ubuntu+Mono:400,700,400italic);
body {
font-family: 'Droid Serif';
}
h1, h2, h3 {
font-family: 'Yanone Kaffeesatz';
font-weight: 400;