Evan Hazlett ehazlett

ClinicalCollections Exhibit Spec

Specification for Clinical Trial exhibit data

Fields

id : text (nct_id)
alt_link : text (url to ct.gov trial)

Runtime Configuration

Create a new OpenShift app:

rhc-create-app -a <app_name> -t diy-0.1

Login to the application host using the credentials from the above command. It will look like ssh://c8812345:123214@<app_name>-username.rhcloud.com:

ssh c8812345:123214@<app_name>-username.rhcloud.com

This is all based on the [alpha release][1].

Properties

From the built-in help system:

For many settings TextMate will look for a .tm_properties file in the current folder and in any parent folders (up to the user’s home folder).

These are simple setting = value listings where the value is a format string in which other variables can be referenced.

This is a quick start for getting ThinkUp running on OpenShift.

Create the OpenShift app

rhc app create -a thinkup -t php-5.3

Add the MySQL cartridge

rhc app cartridge add -a thinkup -c mysql-5.1

	from fabric.api import run, sudo, env
	from fabric.operations import put

	def clone_shigoto(username=None):
	sudo('chmod -R 777 /opt')
	sudo('apt-get install git-core python-setuptools libxml2-dev libxslt-dev')
	sudo('easy_install pip')
	sudo('pip install virtualenv')
	sudo('virtualenv --no-site-packages /opt/ve/shigoto')
	run('cd /opt ; rm -rf shigoto ; git clone https://{0}@github.com/lillyoi/shigoto.git'.format(username))

	Pros
	-----
	* async programming, fast
	* MongoDB JSON to Node win -- avoid middle translation layers
	* Regex allowed in URL routes (Flask doesn't allow regex)
	* Node plugins for just about everything (MongoDB, redis, etc.)
	* node cluster makes scaling relatively painless
	* node specific async features (socket.io, event emitters, etc.) are nice -- the WSGI layer doesn't allow sockets, etc.
	* Wide usage -- 37Signals, eBay, Heroku, rdio, yahoo (https://github.com/joyent/node/wiki/Projects,-Applications,-and-Companies-Using-Node)
	* Re-use existing third-party JS utils (validation, etc.)

	[
	{
	"_id": "NCT00003926",
	"arm_group": [
	{
	"arm_group_label": "Solid/brain tumor patients (1-18 years)",
	"arm_group_type": "Experimental",
	"description": "Patients with solid tumor or brain tumor in the 1-18 years old stratum."
	},
	{

	[program:appname]
	command=/usr/local/bin/uwsgi
	--uid=www-data
	--gid=www-data
	-s /tmp/uwsgi_appname.sock
	-H /opt/ve/appname
	-p 4
	-b 8192
	-M
	--no-orphans

	[program:appname]
	command=/usr/local/bin/uwsgi
	--uid=www-data
	--gid=www-data
	-s /tmp/uwsgi_appname.sock
	-H /opt/ve/appname
	-p 4
	-b 8192
	-M
	--no-orphans