ekg

Keybase proof

I hereby claim:

• I am ekg on github.
• I am ekg (https://keybase.io/ekg) on keybase.
• I have a public key ASBqVDBiA6DmXf7cj1k6CHy4DTYQnbAO-C4vZJcFZFwRlAo

To claim this, I am signing this object:

ekg

Installation

1. put foxdot-cli.py in the same directory as the FoxDot installaton (in case you're using virtualenv, otherwise comment from lines 5 to 7)
2. copy foxdot-mode.el to ~/.emacs.d/lisp
3. add (defvar foxdot-cli-path "/path/to/foxdot-cli/") in your ~/.emacs file
4. in Emacs M-x load-library and complete with foxdot-mode
5. Type C-c C-f or M-x foxdot-start to start
6. Type C-c C-e or M-x foxdot-execute to evaluate a line or a block of code

ekg

#!/usr/bin/python

import sys; 

import pysam

bamFile    = sys.argv[1];

bamFP = pysam.Samfile(bamFile, "rb");