(partial) EasyBuild log for failed build of /local/12900[868].master16.delcatty.gent.vsc/easybuild-DPBtHM/files_pr868/Jellyfish-2.1.3-goolf-1.4.10.eb (PR #868)

Jellyfish-2.1.3-goolf-1.4.10_partial.log

== 2014-05-18 21:35:13,190 main.ConfigureMake INFO 'This is EasyBuild 1.13.0dev (framework: 1.13.0dev, easyblocks: 1.13.0dev) on host node2154.delcatty.os.'
== 2014-05-18 21:35:13,191 main.ConfigureMake INFO 'Init completed for application name Jellyfish version 2.1.3'
== 2014-05-18 21:35:13,191 main.easyblock.<module> INFO 'Obtained application instance of for Jellyfish (easyblock: None)'
== 2014-05-18 21:35:13,191 main.easyblock.<module> DEBUG 'Skip set to False'
== 2014-05-18 21:35:13,191 main.module_generator DEBUG 'Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1279cd0> (eb_ns: False)'
== 2014-05-18 21:35:13,191 main.module_generator DEBUG "List of available module naming schemes: ['EasyBuildModuleNamingScheme']"
== 2014-05-18 21:35:13,192 main.module_generator DEBUG 'Module name Jellyfish/2.1.3-goolf-1.4.10 validated'
== 2014-05-18 21:35:13,193 main.module_generator DEBUG 'Obtained module name Jellyfish/2.1.3-goolf-1.4.10'
== 2014-05-18 21:35:13,193 main.ConfigureMake INFO 'building and installing Jellyfish/2.1.3-goolf-1.4.10...'
== 2014-05-18 21:35:13,193 main.ConfigureMake INFO 'fetching files...'
== 2014-05-18 21:35:13,193 main.ConfigureMake INFO 'Starting fetch step'
== 2014-05-18 21:35:13,194 main.easyconfig.templates DEBUG 'config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'runtest': ['check', 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'sources': [['%(namelower)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easyblock': ['ConfigureMake', 'EasyBlock to use for building', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.1.3', 'Version of software', (0, 'mandatory')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://www.genome.umd.edu/jellyfish.html', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': [' Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['ftp://ftp.genome.umd.edu/pub/jellyfish/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['bio', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [1, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{'files': ['bin/jellyfish'], 'dirs': []}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Jellyfish', 'Name of software', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}'
== 2014-05-18 21:35:13,195 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,195 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,195 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,196 main.easyconfig.templates DEBUG 'name: name, config: Jellyfish'
== 2014-05-18 21:35:13,196 main.easyconfig.templates DEBUG 'name: version, config: 2.1.3'
== 2014-05-18 21:35:13,196 main.easyconfig.templates DEBUG 'name: versionsuffix, config: '
== 2014-05-18 21:35:13,196 main.easyconfig.templates DEBUG 'name: versionprefix, config: '
== 2014-05-18 21:35:13,197 main.easyconfig.templates DEBUG 'config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'runtest': ['check', 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'sources': [['%(namelower)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easyblock': ['ConfigureMake', 'EasyBlock to use for building', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.1.3', 'Version of software', (0, 'mandatory')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://www.genome.umd.edu/jellyfish.html', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': [' Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['ftp://ftp.genome.umd.edu/pub/jellyfish/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['bio', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [1, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{'files': ['bin/jellyfish'], 'dirs': []}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Jellyfish', 'Name of software', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}'
== 2014-05-18 21:35:13,198 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,198 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,198 main.easyconfig.templates DEBUG 'version found in easyconfig is 2.1.3'
== 2014-05-18 21:35:13,198 main.easyconfig.templates DEBUG 'name: name, config: Jellyfish'
== 2014-05-18 21:35:13,198 main.easyconfig.templates DEBUG 'name: version, config: 2.1.3'
== 2014-05-18 21:35:13,199 main.easyconfig.templates DEBUG 'name: versionsuffix, config: '
== 2014-05-18 21:35:13,199 main.easyconfig.templates DEBUG 'name: versionprefix, config: '
== 2014-05-18 21:35:13,199 main.ConfigureMake INFO 'Running method fetch_step part of step fetch'
== 2014-05-18 21:35:13,199 main.ConfigureMake WARNING "Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version"
== 2014-05-18 21:35:13,199 main.run DEBUG 'run_cmd: running cmd which eb (in /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023)'
== 2014-05-18 21:35:13,204 main.run DEBUG 'cmd "which eb" exited with exitcode 0 and output:\n/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb\n'
== 2014-05-18 21:35:13,204 main.run DEBUG 'Using default regular expression: (?<![(,-]|\\w)(?:error|segmentation fault|failed)(?![(,-]|\\.?\\w)'
== 2014-05-18 21:35:13,204 main.easyconfig.tools DEBUG 'Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed...'
== 2014-05-18 21:35:13,205 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs'
== 2014-05-18 21:35:13,210 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs'
== 2014-05-18 21:35:13,210 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.13.0dev-py2.6.egg/easybuild/easybuild/easyconfigs'
== 2014-05-18 21:35:13,210 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs'
== 2014-05-18 21:35:13,210 main.easyconfig.tools DEBUG 'Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs'
== 2014-05-18 21:35:13,211 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.13.0dev-py2.6.egg/easybuild/easyconfigs'
== 2014-05-18 21:35:13,211 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.13.0dev-py2.6.egg/easybuild/easyconfigs'
== 2014-05-18 21:35:13,211 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs'
== 2014-05-18 21:35:13,211 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,211 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,212 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,212 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,212 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,212 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs'
== 2014-05-18 21:35:13,212 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs'
== 2014-05-18 21:35:13,213 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs'
== 2014-05-18 21:35:13,213 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs'
== 2014-05-18 21:35:13,213 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs'
== 2014-05-18 21:35:13,213 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs'
== 2014-05-18 21:35:13,213 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs'
== 2014-05-18 21:35:13,214 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs'
== 2014-05-18 21:35:13,215 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs'
== 2014-05-18 21:35:13,215 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs'
== 2014-05-18 21:35:13,215 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs'
== 2014-05-18 21:35:13,215 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs'
== 2014-05-18 21:35:13,215 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs'
== 2014-05-18 21:35:13,216 main.easyconfig.tools DEBUG 'Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs'
== 2014-05-18 21:35:13,276 main.filetools INFO 'Creating directory /user/data/gent/vsc400/vsc40023/EasyBuild/sources/j/Jellyfish (parents: True, set_gid: False, sticky: False)'
== 2014-05-18 21:35:13,299 main.ConfigureMake DEBUG 'Trying to download file jellyfish-2.1.3.tar.gz from ftp://ftp.genome.umd.edu/pub/jellyfish/jellyfish-2.1.3.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/j/Jellyfish/jellyfish-2.1.3.tar.gz ...'
== 2014-05-18 21:35:13,299 main.filetools DEBUG 'Downloading jellyfish-2.1.3.tar.gz from ftp://ftp.genome.umd.edu/pub/jellyfish/jellyfish-2.1.3.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/j/Jellyfish/jellyfish-2.1.3.tar.gz'
== 2014-05-18 21:35:13,300 main.filetools DEBUG 'Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/j/Jellyfish'
== 2014-05-18 21:35:13,820 main.ConfigureMake DEBUG 'Failed to download jellyfish-2.1.3.tar.gz from ftp://ftp.genome.umd.edu/pub/jellyfish/: [Errno ftp error] [Errno 113] No route to host'
== 2014-05-18 21:35:13,821 main.ConfigureMake ERROR "EasyBuild crashed with an error (at easybuild/framework/easyblock.py:587 in obtain_file): Couldn't find file jellyfish-2.1.3.tar.gz anywhere, and downloading it didn't work either...\nPaths attempted (in order): /local/12900[868].master16.delcatty.gent.vsc/easybuild-DPBtHM/files_pr868/j/Jellyfish/jellyfish-2.1.3.tar.gz, /local/12900[868].master16.delcatty.gent.vsc/easybuild-DPBtHM/files_pr868/Jellyfish/jellyfish-2.1.3.tar.gz, /local/12900[868].master16.delcatty.gent.vsc/easybuild-DPBtHM/files_pr868/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/j/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/j/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/j/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/Jellyfish/jellyfish-2.1.3.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs/jellyfish-2.1.3.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/j/Jellyfish/jellyfish-2.1.3.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/Jellyfish/jellyfish-2.1.3.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/jellyfish-2.1.3.tar.gz, /apps/gent/source/j/Jellyfish/jellyfish-2.1.3.tar.gz, /apps/gent/source/Jellyfish/jellyfish-2.1.3.tar.gz, /apps/gent/source/jellyfish-2.1.3.tar.gz, /nfsmuk/apps/gent/source/j/Jellyfish/jellyfish-2.1.3.tar.gz, /nfsmuk/apps/gent/source/Jellyfish/jellyfish-2.1.3.tar.gz, /nfsmuk/apps/gent/source/jellyfish-2.1.3.tar.gz, ftp://ftp.genome.umd.edu/pub/jellyfish/jellyfish-2.1.3.tar.gz "
== 2014-05-18 21:35:13,821 main.easyblock.<module> WARNING "build failed (first 300 chars): EasyBuild crashed with an error (at easybuild/framework/easyblock.py:587 in obtain_file): Couldn't find file jellyfish-2.1.3.tar.gz anywhere, and downloading it didn't work either...\nPaths attempted (in order): /local/12900[868].master16.delcatty.gent.vsc/easybuild-DPBtHM/files_pr868/j/Jellyfish/jel"
== 2014-05-18 21:35:13,821 main.ConfigureMake INFO 'Closing log for application name Jellyfish version 2.1.3'