Created
November 5, 2015 12:01
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Example LiPD JOSN-LD package. This uses the pattern described at https://www.authorea.com/users/17200/articles/19163/_show_article .
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| { | |
| "@context": { | |
| "Feature": "geojson:Feature", | |
| "FeatureCollection": "geojson:FeatureCollection", | |
| "GeometryCollection": "geojson:GeometryCollection", | |
| "Journal": "http://purl.org/ontology/bibo/Journal", | |
| "LineString": "geojson:LineString", | |
| "MultiLineString": "geojson:MultiLineString", | |
| "MultiPoint": "geojson:MultiPoint", | |
| "MultiPolygon": "geojson:MultiPolygon", | |
| "Person": "http://xmlns.com/foaf/0.1/Person", | |
| "Point": "geojson:Point", | |
| "Polygon": "geojson:Polygon", | |
| "agency": "lipd:fundingAgency", | |
| "archiveModel": "lipd:archiveModel", | |
| "archiveType": "lipd:archiveType", | |
| "article": "http://purl.org/ontology/bibo/Article", | |
| "author": { | |
| "@container": "@set", | |
| "@id": "http://purl.org/dc/elements/1.1/creator" | |
| }, | |
| "basis": "lipd:interpretationBasis", | |
| "bbox": { | |
| "@container": "@list", | |
| "@id": "geojson:bbox" | |
| }, | |
| "calibration": { | |
| "@container": "@list", | |
| "@id": "lipd:calibration" | |
| }, | |
| "climateInterpretation": { | |
| "@container": "@list", | |
| "@id": "lipd:climateInterpretation" | |
| }, | |
| "climateParameter": "lipd:climateParameter", | |
| "climateParameterDetail": "lipd:climateParameterDetail", | |
| "columns": { | |
| "@container": "@set", | |
| "@id": "csvw:Column" | |
| }, | |
| "coordinates": { | |
| "@id": "geojson:coordinates" | |
| }, | |
| "csvw": "http://www.w3.org/ns/csvw#", | |
| "dataDOI": "https://www.datacite.org/", | |
| "dataSetName": "purl:Title", | |
| "datatype": { | |
| "@id": "csvw:datatype", | |
| "@type": "@id" | |
| }, | |
| "description": "purl:description", | |
| "doi": { | |
| "@container": "@set", | |
| "@id": "http://purl.org/ontology/bibo/doi" | |
| }, | |
| "equation": "lipd:calibrationEquation", | |
| "features": { | |
| "@container": "@set", | |
| "@id": "geojson:coordinates" | |
| }, | |
| "filename": "schema:contentUrl", | |
| "funding": { | |
| "@container": "@set", | |
| "@id": "lipd:funding" | |
| }, | |
| "geo": { | |
| "@container": "@list", | |
| "@id": "geojson:Feature" | |
| }, | |
| "geojson": "http://ld.geojson.org/vocab#", | |
| "geometry": "geojson:geometry", | |
| "grant": "lipd:fundingGrant", | |
| "header": "csvw:header", | |
| "id": "@id", | |
| "inferredMaterial": "lipd:inferredMaterial", | |
| "instrument": "schema:instrument", | |
| "interpDirection": "lipd:interpDirection", | |
| "investigators": "purl:Creator", | |
| "issue": "http://purl.org/ontology/bibo/issue", | |
| "journal": "http://purl.org/dc/elements/1.1/isPartOf", | |
| "link": { | |
| "@container": "@set", | |
| "@id": "http://purl.org/dc/elements/1.1/link" | |
| }, | |
| "lipd": "http://lipd.net/", | |
| "measuredMaterial": "lipd:measuredMaterial", | |
| "method": "lipd:method", | |
| "name": "http://www.w3.org/2000/01/rdf-schema#label", | |
| "notes": "csvw:note", | |
| "number": "csvw:number", | |
| "observationModel": "lipd:observationModel", | |
| "pageEnd": "http://purl.org/ontology/bibo/pageEnd", | |
| "pageStart": "http://purl.org/ontology/bibo/pageStart", | |
| "paleoData": { | |
| "@container": "@set", | |
| "@id": "csvw:Table" | |
| }, | |
| "paleoDataTableName": "purl:Title", | |
| "parameter": "csvw:name", | |
| "parameterType": "lipd:parameterType", | |
| "properties": "geojson:properties", | |
| "proxy": "lipd:proxy", | |
| "proxySystemModel": { | |
| "@container": "@list", | |
| "@id": "lipd:PSM" | |
| }, | |
| "pub": { | |
| "@container": "@list", | |
| "@id": "http://okfnlabs.org/bibjson/" | |
| }, | |
| "pubYear": "http://purl.org/dc/elements/1.1/date", | |
| "purl": "http://purl.org/dc/terms/", | |
| "reference": "lipd:calibrationReference", | |
| "schema": "http://schema.org/", | |
| "seasonality": "lipd:seasonality", | |
| "sensorModel": "lipd:sensorModel", | |
| "standard": "purl:Standard", | |
| "title": "http://purl.org/dc/elements/1.1/title", | |
| "type": "@type", | |
| "uncertainty": "lipd:calibrationUncertainty", | |
| "uncertaintyType": "lipd:calibrationUncertaintyType", | |
| "units": "schema:units", | |
| "version": "schema:version", | |
| "volume": "http://purl.org/ontology/bibo/volume", | |
| "xsd": "http://www.w3.org/2001/XMLSchema#" | |
| }, | |
| "archiveType": "Marine Sediments", | |
| "dataDOI": null, | |
| "dataSetName": "RAPiD-12-1K.Thornalley.2009", | |
| "features": [ | |
| { | |
| "geometry": { | |
| "coordinates": [ | |
| -17.82, | |
| 62.08, | |
| -1938 | |
| ], | |
| "type": "Point" | |
| }, | |
| "properties": { | |
| "siteName": "RAPiD-12-1K, South Iceland Rise, northeast North Atlantic" | |
| }, | |
| "type": "Feature" | |
| } | |
| ], | |
| "funding": [ | |
| { | |
| "agency": "NERC", | |
| "grant": "Rapid Climate Change programme" | |
| } | |
| ], | |
| "investigators": "Thornalley, D.J.R; Elderfield, H.; McCave, N", | |
| "paleoData": [ | |
| { | |
| "columns": [ | |
| { | |
| "datatype": "csvw:NumericFormat", | |
| "description": "depth below ocean floor", | |
| "notes": "depth refers to top of sample", | |
| "number": 1, | |
| "parameter": "depth", | |
| "parameterType": "measured", | |
| "units": "cm" | |
| }, | |
| { | |
| "datatype": "csvw:NumericFormat", | |
| "description": "calendar year AD", | |
| "method": "linear interpolation", | |
| "number": 2, | |
| "parameter": "year", | |
| "parameterType": "inferred", | |
| "units": " AD" | |
| }, | |
| { | |
| "calibration": { | |
| "equation": "BAR2005: Mg/Ca=0.794*exp(0.10*SST)", | |
| "reference": "Barker et al., (2005), Thornalley et al., (2009)", | |
| "uncertainty": 1.3 | |
| }, | |
| "climateInterpretation": { | |
| "basis": "Mg/Ca calibration to SST", | |
| "interpDirection": "positive", | |
| "parameter": "T", | |
| "parameterDetail": "seaSurface", | |
| "seasonality": "MJJ" | |
| }, | |
| "datatype": "csvw:NumericFormat", | |
| "description": "sea-surface temperature inferred from Mg/Ca ratios", | |
| "material": "foramifera carbonate", | |
| "number": 3, | |
| "parameter": "temperature", | |
| "parameterType": "inferred", | |
| "proxy": "Mg/Ca", | |
| "units": "deg C" | |
| } | |
| ], | |
| "filename": "Atlantic0220Thornalley2009.csv", | |
| "paleoDataTableName": "data" | |
| } | |
| ], | |
| "pub": { | |
| "author": [ | |
| { | |
| "name": "Thornalley, D.J.R" | |
| }, | |
| { | |
| "name": "Elderfield, H." | |
| }, | |
| { | |
| "name": "McCave, N" | |
| } | |
| ], | |
| "identifier": [ | |
| { | |
| "id": "10.1038/nature07717", | |
| "type": "doi", | |
| "url": "http://dx.doi.org/10.1038/nature07717" | |
| } | |
| ], | |
| "pubYear": 2009, | |
| "type": "article" | |
| }, | |
| "type": "FeatureCollection", | |
| "version": "1.0.0" | |
| } |
Author
Author
Another note....
Given this is JSON-LD, the rather large context aspect can be removed from the rest of the body and linked in.
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It's worth noting that this JSON-LD also contains a GeoJSON aspect. Which github detects and attempts to render as a map. Select the "source" blob view to see the body. This text also correctly parses as JSON-LD via linters like http://json-ld.org/playground/ and http://www.markus-lanthaler.com/jsonld/playground/ as well as GeoJSON linters such as http://geojsonlint.com/ .
This means this data can be quickly cast to RDF, or other structured formats and also easily machine parsed in workflows.