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8x P1 1TB
SeqQ32T1read: (groupid=0, jobs=1): err= 0: pid=2451: Mon Apr 15 22:05:42 2019
  read: IOPS=10.1k, BW=1267MiB/s (1329MB/s)(5120MiB/4041msec)
    clat (usec): min=60, max=1629, avg=97.97, stdev=54.12
     lat (usec): min=60, max=1629, avg=98.05, stdev=54.12
    clat percentiles (usec):
     |  1.00th=[   62],  5.00th=[   62], 10.00th=[   63], 20.00th=[   64],
     | 30.00th=[   66], 40.00th=[   71], 50.00th=[   82], 60.00th=[   94],
     | 70.00th=[  109], 80.00th=[  121], 90.00th=[  145], 95.00th=[  239],
     | 99.00th=[  253], 99.50th=[  265], 99.90th=[  570], 99.95th=[  701],

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sudo apt update
sudo apt install -y build-essential autoconf zlib1g-dev libbz2-dev liblzma-dev libncurses5-dev libperl-dev libgsl-dev

git clone https://github.com/samtools/htslib.git -b 1.9
cd htslib
autoheader
autoconf
./configure
make -j $(nproc)
sudo make install

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# ubuntu server 16.04
/etc/network/interfaces

# dhcp
---
auto eth0
iface eth0 inet dhcp
---

# static

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/etc/sysconfig/network-scripts/ifcfg-eth0

ONBOOT=yes
BOOTPROTO=static
IPADDR=192.168.1.2
NETMASK=255.255.255.0
GATEWAY=192.168.1.1
DNS1=192.168.1.1
DNS2=192.168.1.1

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# 國網專用
import os
os.environ["HDF5_USE_FILE_LOCKING"] = "FALSE"

import os
import multiprocessing
import psutil

IO_THREADS=multiprocessing.cpu_count()
CPU_THREADS=psutil.cpu_count(logical=False)

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# 1.12.0 prevent VRAM occupied
export TF_FORCE_GPU_ALLOW_GROWTH="true"

# <1.12
from keras import backend as K
import tensorflow as tf

config = tf.ConfigProto()
config.gpu_options.allow_growth = True
session = tf.Session(config=config)

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# Older versions of Docker were called docker, docker.io , or docker-engine. If these are installed, uninstall them
sudo apt-get remove docker docker-engine docker.io containerd runc

# SET UP THE REPOSITORY
sudo apt-get update
sudo apt-get install -y \
     apt-transport-https \
     ca-certificates \
     curl \
     gnupg-agent \

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Listing...
accountsservice/now 0.6.40-2ubuntu10 amd64 [installed,local]
acl/now 2.2.52-3 amd64 [installed,local]
acpid/now 1:2.0.26-1ubuntu2 amd64 [installed,local]
adduser/now 3.113+nmu3ubuntu4 all [installed,local]
apparmor/now 2.10.95-0ubuntu2 amd64 [installed,local]
apport/now 2.20.1-0ubuntu2 all [installed,local]
apport-symptoms/now 0.20 all [installed,local]
apt/now 1.2.10ubuntu1 amd64 [installed,local]
apt-transport-https/now 1.2.10ubuntu1 amd64 [installed,local]

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Listing...
accountsservice/now 0.6.45-1ubuntu1 amd64 [installed,local]
acl/now 2.2.52-3build1 amd64 [installed,local]
acpid/now 1:2.0.28-1ubuntu1 amd64 [installed,local]
adduser/now 3.116ubuntu1 all [installed,local]
apparmor/now 2.12-4ubuntu5 amd64 [installed,local]
apport/now 2.20.9-0ubuntu7 all [installed,local]
apport-symptoms/now 0.20 all [installed,local]
apt/now 1.6.1 amd64 [installed,local]
apt-utils/now 1.6.1 amd64 [installed,local]

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sudo apt install -y libcurl4
pip install intervaltree==2.1.0 tensorflow
wget https://github.com/google/deepvariant/releases/download/v0.7.2/deepvariant.zip
unzip deepvariant.zip

python make_examples.zip \
--mode calling \
--ref "ref.fa" \
--reads "marked_duplicates.bam" \
--examples "examples.tfrecord.gz"