This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
if [ ! -d docs ]; then | |
mkdir docs | |
fi | |
KEY="YOUR-KEY" | |
function download_omim { | |
echo "download $1"; | |
curl -s --fail "http://api.omim.org/api/entry?mimNumber=$1&apiKey=$KEY&format=json&include=all" | jq '.omim.entryList[0].entry' > docs/$1 | |
} | |
# curl https://omim.org/static/omim/data/mim2gene.txt | grep -oh '^[0-9]\+' | sort | uniq | \ |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
sudo add-apt-repository ppa:marutter/rrutter | |
sudo apt-get update | |
sudo apt-get install r-base r-base-dev |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
rabbitmq-plugins enable rabbitmq_management | |
rabbitmqctl add_user test test | |
rabbitmqctl set_user_tags test administrator | |
# Admin panel hosted on [ip_address]:15672 |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
echo 'deb http://www.rabbitmq.com/debian/ testing main' |sudo tee /etc/apt/sources.list.d/rabbitmq.list | |
wget -O- https://www.rabbitmq.com/rabbitmq-release-signing-key.asc | sudo apt-key add - | |
sudo apt-get update | |
sudo apt-get install rabbitmq-server |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
chmod 700 ~/.ssh/* |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
sudo apt-get install software-properties-common | |
sudo apt-get install python3-software-properties |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
wget -qO - https://artifacts.elastic.co/GPG-KEY-elasticsearch | sudo apt-key add - | |
sudo apt-get install apt-transport-https | |
echo "deb https://artifacts.elastic.co/packages/5.x-prerelease/apt stable main" | sudo tee -a /etc/apt/sources.list.d/elastic-5.x.list | |
sudo apt-get update | |
sudo apt-get install elasticsearch | |
service elasticsearch start | |
# if service start failed, try to modify -Xms lower like -Xms1g in /etc/elasticsearch/jvm.options |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
wget -O - https://debian.neo4j.org/neotechnology.gpg.key | sudo apt-key add - | |
echo 'deb http://debian.neo4j.org/repo stable/' | sudo tee /etc/apt/sources.list.d/neo4j.list | |
sudo apt-get update | |
sudo apt-get install neo4j |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
sudo add-apt-repository ppa:webupd8team/java | |
sudo apt-get update | |
sudo apt-get install oracle-java8-installer |