gdbassett’s gists

gdbassett / two_barcharts.json

Last active September 15, 2017 23:30

Two bar charts with the goal of controlling one from another

	{
	"$schema": "https://vega.github.io/schema/vega-lite/v2.json",
	"vconcat": [
	{
	"data": {
	"values": [
	{
	"enum": "victim.industry2.52",
	"x": 471,
	"n": 1935,

gdbassett / schema_to_graph.py

Last active September 21, 2017 20:55

function to convert

	import networkx as nx # NOTE: written against dev networkx 2.0
	import logging
	import inspect
	import json

	logger = logging.getLogger()
	fileLogger = logging.FileHandler("~/Documents/Development/tmp/vega.log")
	fileLogger.setLevel(logging.DEBUG)
	logger.addHandler(fileLogger)

gdbassett / flip.R

Created September 27, 2017 19:31

coord_flip for ggvis

	#' Flip the x and y axis
	#'
	#' This is accomplished by updating the x & y marks, updating the flipping the
	#' scales, and updating the axis labels.
	#'
	#' WARNING: This currently works for rectangular layer figures. It may not work with
	#' multiple-layer figures, other marks, or signals.
	#'
	#' WARNING: No tests currently exist for this function
	#'

gdbassett / dbir_vega_bar_chart.json

Created December 8, 2017 15:17

A DBIR bar chart in VEGA

	{
	"$schema": "https://vega.github.io/schema/vega/v3.0.json",
	"width": 500,
	"height": 309,
	"autosize": "pad",
	"data": [
	{
	"name": ".",
	"format": {
	"type": "csv",

gdbassett / crosswalk_github_issues.R

Created December 14, 2017 20:38

A function demonstrating tokenized pagination of graphQL for R, (querying the github API to get vz-risk/VCDB issue IDs to compare to a verisr object)

	#' A function to find github issues which may have been closed w/o being added
	#'
	#' NOTE: Many github issues have 'na' for their issue #, leading to false positives
	#' NOTE: Requires ghql package, currently only at https://github.com/ropensci/ghql
	#' `devtools::install_github("ropensci/ghql")`
	#'
	#' @param veris a verisr dataframe
	#' @param gh_token a github user token for api access
	#' @return a list of github issue numbers not in veris
	#' @export

gdbassett / MaximumEntropyGraph.py

Created January 8, 2018 00:19

A small set of functions to generate maximum entropy graph heirarchies for aggregating graphs

	# Copywrite Gabriel Bassett 2018
	# Not licensed for reuse

	import copy
	import operator
	import uuid
	import networkx as nx
	import logging
	import pprint
	import simplejson as json

gdbassett / vega_cdf_bar_data.csv

Last active March 14, 2019 01:19

We can make this file beautiful and searchable if this error is corrected: It looks like row 8 should actually have 15 columns, instead of 12 in line 7.

	enum,x,n,freq,method,x1,n1,shape1,shape2,mean,lower,upper,sig,y2,x2
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0.005
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0.01
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0.015
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0.02
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.4971023064317177,0.050000011597819416,1,0.025
	Hacking,1055,2215,0.4763,bayes,1055,2215,1055.5,1160.5,0.4763086642599278,0.45552701193652323,0.49710230643171

gdbassett / test_data.csv

Last active July 10, 2019 14:36

enum	x	n	freq	shape1	shape2	x2	y2
Web Applications	581	2013	0.2886	581.5	1432.5	0	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.005	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.01	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.015	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.02	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.025	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.03	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.035	1
Web Applications	581	2013	0.2886	581.5	1432.5	0.04	1

gdbassett / tidy_tuesday_simpsons.ipynb

Created August 27, 2019 18:01

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gdbassett / covid_pop.R

Created April 6, 2020 20:44

Proportion of population having died from covid19 over time by country

	# https://population.un.org/wpp/Download/Standard/Population/
	pop <- readr::read_csv("~/Documents/Data/covid19/population.csv") %>%
	select(`Region, subregion, country or area *`, `Country code`, `2020`) %>%
	rename(name = `Region, subregion, country or area *`, alpha_3 = `Country code`, population=`2020`) %>%
	mutate(population = as.integer(gsub(" ", "", population))) %>%
	mutate(population = population * 1000) %>%
	glimpse()

	# From https://github.com/CSSEGISandData/COVID-19
	covid <- readr::read_csv("~/Documents/Development/COVID-19/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_deaths_global.csv") %>%

Gabe gdbassett