gdlmx

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gdlmx

#!/bin/sh
# Determine which packages exist in the current MSYS2 environment
# Intended to be used in Git-for-Windows

export OUTDIR=$PWD
wget http://repo.msys2.org/msys/x86_64/msys.files.tar.gz
mkdir -p pacman-local msys-files
tar -xf msys.files.tar.gz -C msys-files
function file2pkg () {
  # Find the corresponding package folder and move it to $PWD/pacman-local/

gdlmx

List

• Wikipage: Scientific workflow system
• Awesome pipeline
• CWL: Existing workflow systems

Requirements

1. Dynamic workflow
2. Environment encapsulation

gdlmx

HTTP client

• curl
• Python requests-unixsocket

gdlmx

#!/usr/bin/env python
import os,sys

class BCOLOR:
    if sys.stdout.isatty():
        HEADER = '\033[95m'
        OKBLUE = '\033[94m'
        OKGREEN = '\033[92m'
        WARNING = '\033[93m'
        FAIL = '\033[91m'

gdlmx

# Windows task manager cannot disable some auto startup UWP Apps
# This script provides an alternative method to disable those Apps
# Refs:
#   https://docs.microsoft.com/en-us/uwp/api/windows.applicationmodel.startuptask
# Author: Mingxuan Lin

function DisableUWPStartupTask ([String]$Name) {
    $p = Get-AppxPackage -Name $Name
	  $PkgFN=$p.PackageFamilyName
    Get-Item -Path "HKCU:\Software\Classes\Local Settings\Software\Microsoft\Windows\CurrentVersion\AppModel\SystemAppData\$PkgFN\*StartupTask" | foreach {

gdlmx

Param(
  [string]$containerPath,
  [string]$OwnerName
)
gci -recurse $containerPath  | ? { $_.PSIsContainer -eq $False } | ? {  (Get-ACL -LiteralPath $_.FullName).Owner -ne $OwnerName }

gdlmx

#!/bin/bash
# module load abaqus #dependencies#
ABQHOME=/opt/abaqus6/2017a

export LD_LIBRARY_PATH="${ABQHOME}/SIMULIA/CAE:${ABQHOME}/SIMULIA/CAE/linux_a64:${ABQHOME}/SIMULIA/CAE/linux_a64/code:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin/SMAExternal:${ABQHOME}/SIMULIA/CAE/linux_a64/CAEresources:${ABQHOME}/SIMULIA/CAE/linux_a64/SMA:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin/SMAExternal/Interop:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin/SMAExternal/Elysium:${ABQHOME}/SIMULIA/CAE/linux_a64/tools/SMApy/python2.7/lib/python2.7/lib-dynload:${ABQHOME}/SIMULIA/installation:${ABQHOME}/SimulationServices/V6R2017x/linux_a64/code/bin:$LD_LIBRARY_PATH"
export PATH="${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin/:$PATH"
export PYTHONPATH="${ABQHOME}/SIMULIA/CAE:${ABQHOME}/SIMULIA/CAE/linux_a64:${ABQHOME}/SIMULIA/CAE/linux_a64/code:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin:${ABQHOME}/SIMULIA/CAE/linux_a64/code/bin/SMAExternal:${ABQHOME}/SIMULIA/CAE/linux_a64/CAEresources:${ABQHOME}/SIMULIA/C

gdlmx

#!/bin/bash
set -e

#INTELROOT=$( which ifort | sed -e 's:bin/\w*/*ifort::' )
#source $INTELROOT/bin/compilervars.sh  intel64

function getsrc () {
  local filename=$(basename "$1")
  local dirname=${filename%%-*}
  [ -d ${dirname}*/ ] || ( wget "$1" && tar -xf "$filename" && rm "$filename" )

gdlmx

$cred_file = "${env:\userprofile}\net-drive-cred.xml"

function GetCredentialFromVault([String]$domain ) {
    $x = $domain -split  "@//"
    $UserName = $x[0]
    Try{
        $vault = Import-CliXml -Path $cred_file
    } Catch [System.IO.FileNotFoundException]{
        $vault = @{}