hohonuuli

class CompressedGene:
    def __init__(self, gene: str) -> None:
        self._compress(gene)
        
    def _compress(self, gene: str) -> None:
        self.bit_string = 1 # start with sentinal
        for nucleotide in gene.upper():
            self.bit_string <<= 2 # shift left 2 mits
            if nucleotide == "A": 
                self.bit_string |= 0b00

hohonuuli

import scala.collection.BitSet
import scala.collection.mutable


case class CompressedGene(nucleotideCount: Int, bits: BitSet) {
    override def toString(): String = CompressedGene.decompress(this)
}

object CompressedGene {
    

hohonuuli

import io.reactivex.Observable;

import java.util.function.Supplier;

/**
 * Wrapper around a Supplier (intended to be making remote service request),
 * that will attempt to retry a request if an exception occurs.
 *
 * @author Brian Schlining
 * @since 2019-04-24T13:54:00

hohonuuli

// This function takes a page, which defines the limit and offset
// and makes the web service call using that limit/offset
Function<RequestPager.Page, List<MyObject>> function = (page) -> {
    try {
        return service.someApiCall(page.getLimit(), page.getOffset())
                .get(timeout.toMillis(), TimeUnit.MILLISECONDS);
    } catch (Exception e) {
        throw new RuntimeException("A page request failed", e);
    }
};

hohonuuli

import io.reactivex.Observable;
import io.reactivex.subjects.PublishSubject;
import io.reactivex.subjects.Subject;

import java.util.ArrayList;
import java.util.List;
import java.util.concurrent.*;
import java.util.concurrent.atomic.AtomicInteger;
import java.util.function.Function;
import java.util.function.Supplier;

hohonuuli

import math
from dataclasses import dataclass
from typing import List

__author__ = "Brian Schlining"
__copyright__ = "Copyright 2019, Monterey Bay Aquarium Research Institute"


@dataclass
class Camera:

hohonuuli

#!/usr/bin/env bash

for server in "[email protected]" "[email protected]" "[email protected]"
do
  
echo "--- Deploying and starting Annosaurus at ${server}" 

ssh $server <<'ENDSSH'
  docker pull mbari/annosaurus:latest
  docker stop annosaurus

hohonuuli

# Material desing #400 series of colors https://www.materialui.co/colors

[aws]
symbol = " "

[battery]
full_symbol = ""
charging_symbol = ""
discharging_symbol = ""

hohonuuli

package firebase.jwt;

import com.google.auth.oauth2.GoogleCredentials;
import com.google.firebase.FirebaseApp;
import com.google.firebase.FirebaseOptions;
import com.google.firebase.auth.FirebaseAuth;
import com.google.firebase.auth.FirebaseAuthException;
import com.google.firebase.auth.FirebaseToken;
import io.micronaut.core.io.ResourceResolver;
import io.micronaut.core.io.scan.ClassPathResourceLoader;

hohonuuli

package firebase.jwt;

import java.util.Optional;

public class AuthHeader {
    private final String type;
    private final String token;

    public AuthHeader(String type, String token) {
        this.type = type;