hohonuuli

import io.reactivex.Observable;

import java.util.function.Supplier;

/**
 * Wrapper around a Supplier (intended to be making remote service request),
 * that will attempt to retry a request if an exception occurs.
 *
 * @author Brian Schlining
 * @since 2019-04-24T13:54:00

hohonuuli

import scala.collection.BitSet
import scala.collection.mutable


case class CompressedGene(nucleotideCount: Int, bits: BitSet) {
    override def toString(): String = CompressedGene.decompress(this)
}

object CompressedGene {
    

hohonuuli

class CompressedGene:
    def __init__(self, gene: str) -> None:
        self._compress(gene)
        
    def _compress(self, gene: str) -> None:
        self.bit_string = 1 # start with sentinal
        for nucleotide in gene.upper():
            self.bit_string <<= 2 # shift left 2 mits
            if nucleotide == "A": 
                self.bit_string |= 0b00

hohonuuli

set -g __fish_prompt_grey A3A3A3
set -g __fish_git_prompt_char_cleanstate "✔"
set -g __fish_git_prompt_char_conflictedstate "✖"
set -g __fish_git_prompt_char_dirtystate "✚"
set -g __fish_git_prompt_char_stagedstate "●"
set -g __fish_git_prompt_char_stateseparator \U0020 #\Ue725
set -g __fish_git_prompt_char_untrackedfiles "…"
set -g __fish_git_prompt_char_upstream_ahead "↑"
set -g __fish_git_prompt_char_upstream_behind "↓"
set -g __fish_git_prompt_char_upstream_prefix ""

hohonuuli

# I keep all my config settings in .bashrc. 
# .bash_profile redirects there
if [ -f ~/.bashrc ]; then
  source ~/.bashrc
fi

hohonuuli

import datetime
import json
import sys
import requests

# This example uses mock data. But it outlines the general steps needed.
# If you have a lot of images, they can all be registered in a single
# POST request, but you will need to build a JSON array of data first.
# The details of this bulk load are NOT covered in this example

hohonuuli

import java.net.http.HttpClient;
import java.net.http.HttpRequest;
import java.net.http.HttpResponse;
import java.net.http.HttpResponse.BodyHandlers;
import java.net.http.HttpResponse.BodySubscriber;
import java.net.URI;
import java.nio.ByteBuffer;
import java.nio.charset.StandardCharsets;
import java.util.ArrayList;
import java.util.concurrent.CompletableFuture;

hohonuuli

from datetime import datetime, timedelta
from typing import List, Dict
import iso8601
import requests
import subprocess
import sys

__author__ = "Brian Schlining"
__copyright__ = "Copyright 2018, Monterey Bay Aquarium Research Institute"

hohonuuli

import datetime
import json
import sys
import requests


host = "http://localhost:8084"
client_secret = "foo"

hohonuuli

FROM ubuntu

RUN apt-get update \
  && apt-get install -y --no-install-recommends \
    build-essential \
    curl \
    cmake \
  && rm -rf /var/lib/apt/lists/*

RUN curl -qsSLkO \