I hereby claim:
- I am imagejan on github.
- I am imagejan (https://keybase.io/imagejan) on keybase.
- I have a public key whose fingerprint is 1567 736C EB9C 249A F1B9 01AC 5C71 7F9B 3563 4393
To claim this, I am signing this object:
Jan Eglinger imagejan
imagejan
/ Get_modules_and_scripts.groovy
Last active
June 26, 2018 08:30
How to filter the list of available modules and scripts by input type
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| #@ ModuleService ms | |
| #@ ScriptService ss | |
| ms.getModules().each { module -> | |
| module.inputs().each { input -> | |
| if (input.getType() == java.io.File) { | |
| println "Module $module" | |
| } | |
| } | |
| } |
imagejan
/ DotBlotMeasure.js
Created
October 27, 2016 10:32
A javascript to measure a grid-like spot pattern in ImageJ
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| importClass(Packages.ij.IJ); | |
| importClass(Packages.ij.measure.Measurements); | |
| importClass(Packages.ij.measure.ResultsTable); | |
| importClass(Packages.ij.plugin.filter.ParticleAnalyzer); | |
| importClass(Packages.ij.plugin.frame.RoiManager); | |
| importClass(Packages.java.lang.Double); | |
| var diameter = 6000.0; |
imagejan
/ LongestShortestPath_to_LineSelection.groovy
Created
October 10, 2016 15:01
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| import ij.IJ | |
| import ij.ImageStack | |
| import ij.ImagePlus | |
| import ij.gui.Line | |
| import ij.gui.OvalRoi | |
| import ij.gui.PolygonRoi | |
| import java.awt.Polygon | |
| import sc.fiji.analyzeSkeleton.AnalyzeSkeleton_ | |
| imp = IJ.createImage("Untitled", "8-bit black", 100, 100, 1) |
imagejan
/ Grid_.java
Last active
August 10, 2016 11:03
Grid plugin from https://imagej.net/plugins/grid.html
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| import ij.*; | |
| import ij.process.*; | |
| import ij.gui.*; | |
| import java.awt.*; | |
| import java.awt.geom.*; | |
| import java.util.*; | |
| import ij.plugin.*; | |
| import ij.measure.*; | |
| public class Grid2_ implements PlugIn, DialogListener { |
imagejan
/ keybase.md
Created
June 15, 2016 07:11
imagejan
/ find_peaks.py
Last active
November 9, 2015 16:55
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| # shamelessly hacked for Albert Cardona's example | |
| from ij import WindowManager | |
| from ij.plugin.frame import RoiManager | |
| from ij.gui import PointRoi | |
| from script.imglib.analysis import DoGPeaks | |
| from script.imglib.color import Red | |
| from script.imglib.algorithm import Scale3D | |
| from script.imglib.math import Compute | |
| from script.imglib import ImgLib |
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| import ij.IJ; | |
| import ij.gui.GenericDialog; | |
| import ij.gui.DialogListener; | |
| import ij.ImagePlus; | |
| import ij.plugin.PlugIn; | |
| import java.awt.AWTEvent; | |
| import java.awt.Scrollbar; | |
| public class Dialog_Test implements PlugIn, DialogListener { | |
| private static GenericDialog gd; |
imagejan
/ gist:d926bdae8f959d43eef1
Last active
November 8, 2015 19:37
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| Verifying that +imagejan is my blockchain ID. https://onename.com/imagejan |
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