Yasunobu Okamura informationsea

Ph.D (Information Sciences)

informationsea / japan-ip.txt

Last active December 22, 2015 01:29

IPv4 addresses assigned to Japan (20130831 update)

informationsea / outofjapan-ip.txt

Created August 31, 2013 09:38

IPv4 addresses which is not assigned to Japan and private, link local, multicast, loopback

informationsea / make-ip-list.py

Last active December 22, 2015 01:29

Make IP address list of Japan

	#!/usr/bin/env python

	# Copyright (C) 2013 Yasunobu OKAMURA
	# GPLv3 or later

	import argparse
	import ipaddress # pip install py2-ipaddress

	def inverse_range(addr_range):
	"""

informationsea / reformat_fasta.py

Created September 22, 2013 15:00

Re-format FASTA file.

	#!/usr/bin/env python

	import argparse
	import sys
	import Bio.SeqIO

	def _main():
	parser = argparse.ArgumentParser(description="Re-format fasta file")
	parser.add_argument('input', default=sys.stdin, nargs='?')
	parser.add_argument('output', default=sys.stdout, nargs='?')

informationsea / .bashrc

Last active September 8, 2016 14:50

	# -- shell-script --

	# If not running interactively, don't do anything
	[ -z "$PS1" ] && return

	# ==== system configuration ====

	if [ -f /etc/bashrc ]; then
	. /etc/bashrc
	fi

informationsea / count-bam.py

Created October 8, 2013 03:44

Count mapped reads and unmapped reads in bam files.

	#!/usr/bin/env python

	import argparse
	import pysam

	def _main():
	parser = argparse.ArgumentParser(description="Count mapped reads and unmapped reads")
	parser.add_argument('bam', nargs='+')
	options = parser.parse_args()

informationsea / growl.applescript

Created November 5, 2013 03:08

Growl script for Maverick's Message

	on showgrowl(theNotify, theImage, theTitle, theMessage)
	tell application "Growl"
	-- Make a list of all the notification types
	-- that this script will ever send:
	set the allNotificationsList to ¬
	{"Login", "Logout", "Present", "Text Message", "Invitation", "File Transfer Completed"}

	-- Make a list of the notifications
	-- that will be enabled by default.
	-- Those not enabled by default can be enabled later

informationsea / tweet.py

Created December 11, 2013 12:20

Twitter Post

	#!/usr/bin/env python

	import argparse
	import twitter

	def _main():
	parser = argparse.ArgumentParser(description="Tweet something")
	parser.add_argument('status')
	options = parser.parse_args()

informationsea / ipmitoolsensor.sh

Created December 19, 2013 03:58

Munin plugin

	#!/bin/sh

	#. $MUNIN_LIBDIR/plugins/plugin.sh

	TEMP=`ipmitool sensor\|grep 'Temp'`
	NUM=`echo "$TEMP"\|wc -l`

	if [ "$1" == "config" ];then
	cat <<EOF
	graph_title Temperatures

informationsea / post-macdeployqt.sh

Created February 15, 2014 17:03

Sign Qt based application