James A. Overton jamesaoverton

jamesaoverton / Rakefile

Created October 25, 2011 19:43

Preprocess Slim layout templates for Jekyll.

	require 'rubygems'
	require 'slim'

	Slim::Engine.set_default_options :pretty => true

	desc "Parse .slim layouts, ignoring any YAML front matter."
	task :parse_slim do
	print "Parsing Slim layouts..."
	Find.find('_layouts/slim/') do \|filename\|
	if filename.match(/\.slim\Z/)

jamesaoverton / slim_converter.rb

Created October 25, 2011 19:45

Slim converter for Jekyll.

	module Jekyll
	require 'slim'
	Slim::Engine.set_default_options :pretty => true

	class SlimConverter < Converter
	safe true
	priority :low

	def matches(ext)
	ext =~ /slim/i

jamesaoverton / tab.rb

Created October 27, 2011 00:37

Jekyll plugin for generating tag index files and directories.

	module Jekyll

	class TagIndex < Page
	def initialize(site, base, dir, tag)
	@site = site
	@base = base
	@dir = dir
	@name = 'index.html'

	self.process(@name)

jamesaoverton / tree.py

Created November 25, 2016 13:22

	#!/usr/bin/env python3
	#
	# Generate a tree representation
	# from SPARQL result listing ?subject and ?parent.
	# The CSV representation is for IEDB Finder TREE tables.
	# The JSON representation works with inspire-tree.

	import argparse, csv, re, sys
	from collections import defaultdict
	from io import StringIO

jamesaoverton / my-solarized.js

Last active October 16, 2020 20:37

Customized Solarized Light theme for Blink Shell

	t.prefs_.set('color-palette-overrides',["#002831", "#d11c24", "#738a05", "#a57706", "#2176c7", "#c61c6f", "#259286", "#eae3cb", "#001e27", "#bd3613", "#475b62", "#536870", "#708284", "#5956ba", "#819090", "#ffffff"]);
	t.prefs_.set('foreground-color', "#333333");
	t.prefs_.set('background-color', "#ffffff");
	t.prefs_.set('cursor-color', 'rgba(83,104,112,0.2)');

jamesaoverton / ivy.xml

Created May 30, 2017 17:21

	<ivy-module version="2.0">
	<info organisation="org.obi-ontology" module="build"/>
	<dependencies>
	<dependency org="commons-cli" name="commons-cli" rev="1.2" />
	<dependency org="net.sourceforge.owlapi" name="owlapi-apibinding" rev="3.4.5" />
	<dependency org="com.hermit-reasoner" name="org.semanticweb.hermit" rev="1.3.8.1" />
	<dependency org="au.com.bytecode" name="opencsv" rev="2.4" />
	<dependency org="org.apache.jena" name="jena-arq" rev="2.12.0" />
	<dependency org="org.apache.jena" name="jena-tdb" rev="1.1.0" />
	</dependencies>