jeanpat
/ Download_from_github_2164-dataset.ipynb
Created
January 31, 2020 12:15
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jeanpat
/ Clean Dataset from their spurious pixels.ipynb
Last active
January 31, 2020 12:09
This jupyter notebook can be used to clean the groundtruth images from the following dataset: https://github.com/jeanpat/DeepFISH/blob/master/dataset/LowRes_13434_overlapping_pairs.h5
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jeanpat
/ Fluctuation-naissances.ipynb
Created
November 19, 2019 07:12
Introduction à python et fluctuation d'échantillonage
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jeanpat
/ LoadingDataset-Second Generation-save for SegCaps.ipynb
Created
August 26, 2018 08:23
Loading a subset of images to copy them in the data directory of SegCaps
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| # -*- coding: utf-8 -*- | |
| """ | |
| Created on Wed Mar 30 13:04:37 2016 | |
| @author: jeanpat | |
| """ | |
| import pandas as pn | |
| from itertools import product | |
| import ClassChromosome as K |
jeanpat
/ Tinkering_with_OverlapSegmentationNet-01.ipynb
Last active
October 12, 2017 14:11
Exploration of a Keras model trained for 14 epochs (not enough)
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jeanpat
/ CurvedPointsOncontour.py
Created
August 26, 2017 10:11
Looking for bending points on the polygonal approximation of a contour
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| # -*- coding: utf-8 -*- | |
| """ | |
| Created on Tue Oct 23 08:06:37 2012 | |
| @author: Jean-Patrick | |
| """ | |
| import os | |
| import numpy as np | |
| import matplotlib.pyplot as plt | |
| import skimage.io as sio |
jeanpat
/ cuting_touching_chromosomes.py
Created
July 13, 2017 14:53
Try to find paths between touching mouse chromosomes to separate them
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| # -*- coding: utf-8 -*- | |
| """ | |
| Created on Tue Oct 23 08:06:37 2012 | |
| @author: Jean-Patrick | |
| """ | |
| import os | |
| import numpy as np | |
| import matplotlib.pyplot as plt | |
| import skimage.io as sio |
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