James Slagle jrslagle
jrslagle
/ LPSN_parcer.rb
Created
January 1, 2016 10:57
a script to parse bacterial phylogeny from http://www.bacterio.net/-classifphyla.html and print it into a table format.
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| # original text is from http://www.bacterio.net/-classifphyla.html | |
| # load hard-coded filename LPSN.txt into a string | |
| # create a File object from LPSN.txt | |
| file = open("LPSN.txt") or die "LPSN.txt not found." | |
| lineArray = Array.new | |
| file.each_line {|line| | |
| lineArray.push line | |
| } | |
| file.close() | |
| # todo: parse lines your own way if it helps separate genuses. |