Julian Giordani julesghub

HPC commands to download and run the Underworld sigularity container.

REMEMBER to change the following strings:

/FOO/BAR/ to your desired path, i.e gdata or scratch.
IMAGE-NAME.sif to what you want the container file to be called.

These two strings MUST match up with the same strings in runner scripts.

For Gadi gadi.nci.org.au - Info on gadi.

Guide to setting up and installing a bare metal underworld install on [email protected]

1st - Setup python venv

FOO=/some/path/in/scratch

module load petsc/3.21.3 python3/3.12.1 openmpi/4.1.7 python3-as-python swig/4.0.2 hdf5/1.12.2p
export CC='mpicc' CXX='mpicxx' F90='mpifort' F77='mpifort' LD='mpicc' LDSHARED='mpicc -shared'
python -mvenv --system-site-packages $FOO/venv/uw_env

	#!/bin/bash -l

	# Installation script installing Underworld (baremetal) on Setonix
	# A python virtual environment is made under your $PAWSEY_PROJECT directory, ie,
	# /software/projects/$PAWSEY_PROJECT/setonix/venv/py311

	## installing latest uw2 on setonix
	module load petsc/3.20.1-nocomplex py-pip/23.1.2-py3.11.6 py-h5py/3.8.0

	# Now create a python virtual directory