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kennethbruskiewicz / gtd_basb_templates.org
Created March 9, 2022 05:18 — forked from mwfogleman/gtd_basb_templates.org
GTD/BASB Templates for Emacs and Org-Mode
@kennethbruskiewicz
kennethbruskiewicz / analysis.draft.md
Created July 5, 2020 16:19 — forked from MattPD/analysis.draft.md
Program Analysis Resources (WIP draft)
@kennethbruskiewicz
kennethbruskiewicz / .gitignore
Created November 20, 2019 19:35 — forked from cornhundred/.gitignore
D3 Clustergram with zoom/panning, reordering, and search.
# Compiled source #
###################
*.com
*.class
*.dll
*.exe
*.o
*.so
# Packages #
@kennethbruskiewicz
kennethbruskiewicz / nginx.conf
Created July 26, 2019 03:27 — forked from micho/nginx.conf
nginx config for http/https proxy to localhost:3000
First, install nginx for mac with "brew install nginx".
Then follow homebrew's instructions to know where the config file is.
1. To use https you will need a self-signed certificate: https://devcenter.heroku.com/articles/ssl-certificate-self
2. Copy it somewhere (use full path in the example below for server.* files)
3. sudo nginx -s reload
4. Access https://localhost/
Edit /usr/local/etc/nginx/nginx.conf:
# Python File Pre-Processing
import pandas as pd
df = pd.read_csv("35509-0001-Data.tsv", sep='\t',nrows=100)
drugFilter0 = []
# BINARY
drugEVER = ["CIGEVER", "SNFEVER", "CHEWEVER", "PIPEVER", "ALCEVER", "MJEVER", "COCEVER", "CRKEVER", "HEREVER", "INHEVER", "ANLEVER", "STMEVER", "SEDEVER", "BLNTEVER", "TRNEVER"]
{"schema": {"fields":[{"name":"index","type":"integer"},{"name":"CIGEVER","type":"integer"},{"name":"SNFEVER","type":"integer"},{"name":"CHEWEVER","type":"integer"},{"name":"PIPEVER","type":"integer"},{"name":"ALCEVER","type":"integer"},{"name":"MJEVER","type":"integer"},{"name":"COCEVER","type":"integer"},{"name":"CRKEVER","type":"integer"},{"name":"HEREVER","type":"integer"},{"name":"INHEVER","type":"integer"},{"name":"ANLEVER","type":"integer"},{"name":"STMEVER","type":"integer"},{"name":"SEDEVER","type":"integer"},{"name":"BLNTEVER","type":"integer"},{"name":"TRNEVER","type":"integer"},{"name":"INDEX","type":"integer"}],"primaryKey":["index"],"pandas_version":"0.20.0"}, "data": [{"index":0,"CIGEVER":1,"SNFEVER":2,"CHEWEVER":2,"PIPEVER":2,"ALCEVER":2,"MJEVER":2,"COCEVER":2,"CRKEVER":0,"HEREVER":2,"INHEVER":0,"ANLEVER":0,"STMEVER":0,"SEDEVER":0,"BLNTEVER":2,"TRNEVER":0,"INDEX":0},{"index":1,"CIGEVER":1,"SNFEVER":1,"CHEWEVER":2,"PIPEVER":2,"ALCEVER":1,"MJEVER":1,"COCEVER":1,"CRKEVER":2,"HEREVER":2,"INHEVER":
{"0":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"1":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"2":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"3":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"4":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"5":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"6":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"7":{"CG30EST":0,"SN30EST":0,"CH30EST":0,"CI30EST":0,"AL30EST":0,"MR30EST":0,"CC30EST":0,"CR30EST":0,"HR30EST":0,"HL30EST":0},"8":{"CG30EST":
We can't make this file beautiful and searchable because it's too large.
CASEID DRUG VALUE
1 ALCYFU 0.0
1 IIALCYFU 9.0
1 IRALCYFU 0.0
1 IIANLYFU 9.0
1 IRANLYFU 0.0
1 BLNTYFU 0.0
1 CIGYFU 2012.0
1 CRKYFU 0.0
1 IRCRKYFU 0.0
This file has been truncated, but you can view the full file.
CASEID TYPE VALUE
1 CIGEVER 1
1 SNFEVER 2
1 CHEWEVER 2
1 PIPEVER 2
1 ALCEVER 2
1 MJEVER 2
1 COCEVER 2
1 CRKEVER 91
1 HEREVER 2
This file has been truncated, but you can view the full file.
CASEID TYPE VALUE
1 CIGEVER 1
1 SNFEVER 2
1 CHEWEVER 2
1 PIPEVER 2
1 ALCEVER 2
1 MJEVER 2
1 COCEVER 2
1 CRKEVER 91
1 HEREVER 2