klmr

#!/bin/bash
set -e
set -u

failed=0

for file in *.fq.gz; do
    md5=$(gunzip -c "$file" | openssl md5 | cut -f2 -d " ")
    gold=$(grep "${file/.gz/}" md5sums.txt | cut -f2)
    if [ "$md5" != "$gold" ]; then

klmr

TATA.\{6,\}T[AG]G[CT]..A...G.\{33,\}G[AT]TC[AG]A..C.*TTTT

klmr

template <typename T>
struct iota_iterator : std::iterator<std::random_access_iterator_tag, T> {
    typedef std::iterator<std::random_access_iterator_tag, T> base_t;
    typedef typename base_t::difference_type difference_type;

    iota_iterator(T value = T()) : value(value) { }

    iota_iterator& operator ++() {
        ++value;
        return *this;

klmr

var result = 42.Match()
    .With(13, x => "thirteen")
    .WithRange(13, 42, x => "between 13 and 42")
    .WithRange(42, 45, x => "between 42 and 45")
    .Default(x => "not found")
    .Get<string>();

klmr

#ifndef UTIL_LANG_RANGE_HPP
#define UTIL_LANG_RANGE_HPP

#include <iterator>

namespace util { namespace lang {

namespace detail {

template <typename T>

klmr

#include <cstdlib>
#include <fstream>
#include <iomanip>
#include <iostream>
#include <memory>
#include <sstream>
#include <stdexcept>
#include <string>
#include <vector>

klmr

#' (Re-)source parts of a file
#'
#' \code{rs} loads, parses and executes parts of a file as if entered into the R
#' console directly (but without implicit echoing).
#'
#' @param filename character string of the filename to read from. If missing,
#' use the last-read filename.
#' @param from first line to parse.
#' @param to last line to parse.
#' @return the value of the last evaluated expression in the source file.

klmr

" Basic settings {{{
set nocompatible
set nobackup
set ignorecase
set smartcase
set incsearch
set hlsearch

"set guifont=Consolas:h14
" Let's have a bit of fun!

klmr

interface Addable<T> {
    T AddTo(T rhs);
}

T AddTwoThings(T lhs, T rhs) where T : Addable<T> {
    return lhs.AddTo(rhs);
}

static class IntExtensions {
    // Pseudo-syntax

klmr

var createSlideNumbering = function (skipFirstN) {
    var num = 0;
    $('.slides article').each(function () {
        num += 1;
        if (num <= skipFirstN)
            return;

        jQuery('<div/>', {
            class: 'counter',
            text: num