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kmtu / build-fftw3-nec-sx.sh
Last active August 29, 2015 14:12 — forked from derekbrokeit/build-fftw3-nec-sx.sh
#!/bin/sh
# fix the configure files
patch -p1 config.guess < fix-config-sx9.diff
# make the build directory
mkdir -p builder
cd builder
# configure
@kmtu
kmtu / run_md-npt.sh
Last active November 13, 2015 05:18
Produce a cpt file every 1 ns for NPT run (for Gromacs ver. 5.1)
#!/bin/sh
cd ${PBS_O_WORKDIR}
NPROCS=`wc -l <$PBS_NODEFILE`
GMDIR=$HOME/local/gromacs-5.1/bin
GMX=$GMDIR/gmx_d
GROMPP="$GMX grompp"
TPBCONV="$GMX convert-tpr"
MDRUN=$GMDIR/mdrun_mpi_d
@kmtu
kmtu / Documentation.md
Created December 2, 2016 08:58 — forked from KartikTalwar/Documentation.md
Rsync over SSH - (40MB/s over 1GB NICs)

The fastest remote directory rsync over ssh archival I can muster (40MB/s over 1gb NICs)

This creates an archive that does the following:

rsync (Everyone seems to like -z, but it is much slower for me)

  • a: archive mode - rescursive, preserves owner, preserves permissions, preserves modification times, preserves group, copies symlinks as symlinks, preserves device files.
  • H: preserves hard-links
  • A: preserves ACLs
@kmtu
kmtu / tmux-share.sh
Last active May 22, 2017 09:31
A bash script simplifying the procedure of sharing tmux session between users
#!/bin/bash
cmds=('new' 'join' 'list')
socket="/tmp/tmux-share"
grp="ggparty"
bin=tmux-share
usage0="tmux-share ${cmds[0]} <name>"
usage1="tmux-share ${cmds[1]} [<name>]"
usage2="tmux-share ${cmds[2]}"
usage="Usage:\n$usage0\n$usage1\n$usage2"