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Toshiaki Katayama ktym

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  • Database Center for Life Science
  • Japan
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@ktym
ktym / darkgenes.json
Created October 17, 2023 04:53
{
"A4GALT": "18149",
"ABCG8": "13887",
"ABI1": "11320",
"ABO": "79",
"ACSBG2": "24174",
"ADAMTS10": "13201",
"ADAMTSL2": "14631",
"AFP": "317",
"AGL": "321",
@ktym
ktym / bh23.9.json
Last active September 26, 2023 02:08
[
{
"category": "建築家",
"type": "JP",
"count": 3.69
},
{
"category": "論理学者",
"type": "JP",
"count": 7.19
@ktym
ktym / Eukaryotes.csv
Created February 22, 2023 05:46
We can't make this file beautiful and searchable because it's too large.
Species,TaxID,Protein tag sequence
Aaosphaeria arxii,1450171,LREIVMTASAKISTPSMQLYPREELSIADCEKFAKSISRLPLSSVLDKVTITEELGQGTAIQQARKFKIRMDFYPAKEYTAEYAIKVRDVAESLEKKFCPRLHKVIRADLKKQQANRSLSTASSASVPQVGQSSGTIEQATTRTADNEGGRDDDESDDGDDDGDATNAKQRGRRAESVEFEAPDEDEEQIIDRIRTEGSDEEDETYGGSPKPSRAASPDQDSDSEDEETVVAREEASDIRRDRILKACGDVYDFRFDDKAGGFCEIYLEYPAEAPKVLMLNHVEATAEFATIHVIPGIKSAQVTTEKVPDPVTGEEVKKVTGIITEGANLVAMQDYPHIVDTNRLFTNDIALMLRLYGVEACRATIVREMHAVFSGH
Abies balsamea,90345,LREILMTASKKILTPVMTCPLRKGKTREDAERLAAKLRRIRFADLIQSLDIGIVPFSVSNGHVQTVYKLRIKLYPPAFYPQYSNLSLVDCEKTFRNQYIEVLGKEIDIALKKARKSGQEAVQIVSEPLPMDGSGVTSEDESQVNLNSREQTEDEDEQDDEAEDEGADAQKRKSQGTDVMDYDDENDEDEMSMVENICNEENSLEEDDVDNRSDVHNEAVEDEDIEEENSSKTVKASRSAEKKSNESLKESKKVKKKSKKDKTEATGVIIKGTTFEVHFPVERNTHILLAPIAEKVAKKVFVHSVDNIDRCSVIDYNGDSNVPALQTDGINFKVLWMRSDELDINRLTTNDINAMLEVYGVESARATIVAEVKGVFDSY
Abies lasiocarpa,34340,LREILMTASKKILTPVMTCPLRKGKTREDAERLAAKLRRIRFADLIQSLDIGIVPFSVSNGHVQTVYKLRIKLYPPAFYPQYSNLSLVDCEKTFRNQYIEVLGKEIDIALKKARKSGQEAVQIVSEPLPMDGSGVTSEDESQVNLNSREQTEDEDEQDDEAE
@ktym
ktym / mise.json
Last active January 12, 2023 07:47
{
"nodes": [
{"id": "Myriel", "group": "壱"},
{"id": "Napoleon", "group": "壱"},
{"id": "Mlle.Baptistine", "group": "壱"},
{"id": "Mme.Magloire", "group": "壱"},
{"id": "CountessdeLo", "group": "壱"},
{"id": "Geborand", "group": "壱"},
{"id": "Champtercier", "group": "壱"},
{"id": "Cravatte", "group": "壱"},
@ktym
ktym / tree-data.json
Last active December 28, 2022 05:53
[
{
"id": 0,
"value": "My Home",
"label": "My Home",
"children": [1, 31, 39]
},
{
"id": 1,
"value": "transcript_variant",
@ktym
ktym / togodx-idconvert-route.tsv
Last active May 17, 2022 10:21
source route target
ensembl_gene uniprot,reactome_reaction chebi
ensembl_gene uniprot,reactome_reaction,chebi chembl_compound
ensembl_gene uniprot chembl_target
ensembl_gene uniprot glytoucan
ensembl_gene hgnc
ensembl_gene ncbigene,medgen hp
ensembl_gene ncbigene medgen
ensembl_gene ncbigene,medgen mesh
ensembl_gene ncbigene,medgen mondo
@ktym
ktym / swagger-config.yaml
Last active March 17, 2022 07:21
swagger: '2.0'
info:
title: Togo ID API
version: 2.0.0
host: api.togoid.dbcls.jp.il3c.com
schemes:
- https
produces:
- application/json
tags:
@ktym
ktym / ay29w.tsv
Last active January 26, 2022 16:48
series key value
2020-12-28 1 0
2020-12-28 1.38.1 0
2020-12-28 1.38.1.3 0
2020-12-28 1.38.1.4 0
2020-12-28 1.1 0
2021-01-04 1 0
2021-01-04 1.38.1 0
2021-01-04 1.38.1.3 0
2021-01-04 1.38.1.4 0
@ktym
ktym / ay29.tsv
Last active January 20, 2022 07:52
series key value
2021-01-01 1 0
2021-01-01 1.38.1 0
2021-01-01 1.38.1.3 0
2021-01-01 1.38.1.4 0
2021-01-01 1.1 0
2021-01-02 1 0
2021-01-02 1.38.1 0
2021-01-02 1.38.1.3 0
2021-01-02 1.38.1.4 0
@ktym
ktym / mp.md
Created September 30, 2021 00:38

MP test

in code block

<script type="module" src="https://togostanza.github.io/openstanza/manhattan-plot.js" async></script>

<togostanza-manhattan-plot
  data-url="https://raw.githubusercontent.com/togostanza/openstanza/main/stanzas/manhattan-plot/assets/manhattan-plot.json"
 chromosomeKey="chr"