lindenb

# input is
#  DATA/father.R1.fq.gz
#  DATA/father.R2.fq.gz
#  DATA/mother.R1.fq.gz
#  DATA/mother.R2.fq.gz
#  DATA/child.R1.fq.gz
#  DATA/child.R2.fq.gz
#
define mapreads

lindenb

Boulet

• carbon pen platinium DP800S
• aquarelle winsor & newton
• pinceaux "Raphaël*
• papier 250g Clairefontaine

lindenb

Pas de problème, voici les règles pour un jeu de plateau inspiré de Monopoly, mais situé dans un laboratoire de recherche en génétique, où les joueurs achètent des laboratoires plutôt que des propriétés :

Matériel :

• Plateau de jeu
• Cartes "Chercheurs invités"
• Cartes "Subventions"
• Pions (molécule d'ADN, microscope, fiole, pipette, gant de laboratoire)
• Billets de publications scientifiques (au lieu d'argent)
• Laboratoires (au lieu de propriétés)

lindenb

Don't upload images when you can just copy and paste the text.

The following PNG image has a weight of 357,000 bytes

while the text containing the very same information is about only 1,109 bytes, hence a much lower carbon footprint.

##sequence-region JAFJXZ010000052.1 1 250

lindenb

/* author Pierre Lindenbaum */

params.vcfs="NO_FILE"
params.samples="NO_FILE"

workflow {
	each_vcf = Channel.fromPath(params.vcfs).splitText().map{it.trim()}

	c2vcf = CHROMS_IN_VCF(each_vcf)

lindenb

with include{MyTest}

Cannot find a component with name 'MyTest' in module: .../20230103.nf.class/./class.nf

 -- Check script 'test.nf' at line: 2 or see '.nextflow.log' file for more details

without include{MyTest}

lindenb

find scientists having a mastodon account using wikidata:

https://query.wikidata.org/#SELECT%20DISTINCT%20%3Fperson%20%3FpersonLabel%20%3FworkLabel%20%3Fmastodon%20%0A%0A%20%20WHERE%20%7B%0A%20%20%20%20%3Fperson%20wdt%3AP31%20wd%3AQ5%20.%0A%20%20%20%20%3Fperson%20wdt%3AP101%20%3Fwork%20.%0A%20%20%20%20%3Fperson%20wdt%3AP4033%20%3Fmastodon%20.%0A%20%20%20%20FILTER%20%28%3Fwork%20IN%20%28wd%3AQ128570%20%2C%20wd%3AQ7162%20%2C%20wd%3AQ214746%20%29%20%29%20.%0A%20%20%20%20SERVICE%20wikibase%3Alabel%20%7B%20bd%3AserviceParam%20wikibase%3Alanguage%20%22%5BAUTO_LANGUAGE%5D%2Cen%22.%20%7D%0A%20%20%20%20%20%20%20%20%20%20%20%20%0A%20%20%7D%0A%20%20LIMIT%20100%0A%0A

lindenb

CC?=gcc

ifeq ($(HTSLIB),)
$(error undefined $$HTSLIB)
endif

CFLAGS= -Wall -O3 -I$(HTSLIB)
LDFLAGS=  -L$(HTSLIB) -lz -lhts

lindenb

import java.io.*;
import java.util.*;
public class Biostar9532375 {
private static class Sequence {
	String name;
	StringBuilder seq=new StringBuilder();
	boolean same(char c1,char c2) {
		if(c1==c2) return true;
		if(c1=='N' || c2=='N') return true;
		return false;

lindenb

#include <stdio.h>
#include <string.h>
#include <stdlib.h>
#include <ctype.h>

#define MAX_SEQ_LENGTH 100

static char compl(char c) {
	switch(c) {
		case 'A': return 'T';